Ask NMR questions! Earn NMR points Redeem NMR points Vote for NMR papers Twitter Ask to aggregate a site  Our Linkedin group BioNMR User Name Remember Me? Password Home Forums Wiki NMR feeds Downloads Register Today's Posts Search Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues NMR books: NMR books NMR theses: NMR theses All papers: All papers By topic: Protein-ligand interactions Solid-state high-resolution NMR NMR online resources: Educational web pages NMR presentations Educational web pages Educational videos News from other NMR forums NMR news NMR tweets NMR bookmarks NMR pictures NMR links BioNMR stuff: Feedback, suggestions, requests Announcements Test forum Sample preparation: Proteins General: General Software feature requests NMR software Spectrum analysis Molecular Modeling: NMR structure calculation Dynamics by NMR Structure analysis Molecular Dynamics Downloads: BioNMR downloads NMR processing: NMRPipe MDD NMR assignment: Backbone: Autoassign MARS UNIO Match PINE Side-chains: UNIO ATNOS-Ascan NOEs: UNIO ATNOS-Candid UNIO Candid ASDP Structure from NMR restraints: Ab initio: GeNMR Dynamo Cyana XPLOR-NIH ASDP UNIO ATNOS-Candid UNIO Candid Amber Fragment-based: BMRB CS-Rosetta Rosetta-NMR (Robetta) Template-based: GeNMR I-TASSER Refinement: Amber Structure from chemical shifts: Fragment-based: WeNMR CS-Rosetta BMRB CS-Rosetta Homology-based: CS23D Simshift Torsion angles from chemical shifts: TALOS Preditor Promega- Proline Secondary structure from chemical shifts: TALOS MICS caps, β-turns d2D PECAN CSI (via RCI server) Flexibility from chemical shifts: RCI Interactions from chemical shifts: HADDOCK Chemical shifts re-referencing: Shiftcor UNIO Shiftinspector LACS CheckShift RefDB NMR model quality: Agreement with distance restraints: PROSESS PSVS RPF scores iCing Agreement with chemical shifts: PROSESS CheShift2 Vasco iCing Agreement with RDCs: DC Anisofit Agreement with pseudocontact shifts: Anisofit Agreement with typical protein geomtery: Resolution-by-Proxy PROSESS What-If iCing PSVS MolProbity SAVES2 or SAVES4 Vadar Prosa ProQ MetaMQAPII PSQS Eval123D STAN Ramachandran Plot Rampage ERRAT Verify_3D Harmony Quality Control Check NMR spectrum prediction: FANDAS MestReS V-NMR Flexibility from structure: Backbone S2 Methyl S2 B-factor Molecular dynamics: Gromacs Amber Antechamber Chemical shifts prediction: From structure: Shiftx2 Sparta+ Camshift CH3shift- Methyl ArShift- Aromatic ShiftS Proshift PPM CheShift-2- Cα From sequence: Shifty Camcoil Poulsen_rc_CS Disordered proteins: MAXOCC Format conversion & validation: CCPN From NMR-STAR 3.1 Validate NMR-STAR 3.1 NMR sample preparation: Protein disorder: DisMeta Protein solubility: camLILA ccSOL Camfold camGroEL Zyggregator Isotope labeling: UPLABEL Solid-state NMR: sedNMR

» NMR Jobs Professor or Associate Professor in Biological NMR Spetroscopy at Aarhus University (874792) |... by nmrlearner Principal Analytical Chemist | Calhoun Vision, Inc. by nmrlearner Assistant, Associate or Full Professor of Pharmacognosy | The University of Mississippi, School of... by nmrlearner » Cool papers Probing the energy barriers and stages of membrane protein unfolding using solid-state NMR... by nmrlearner An Amphiphilic Cell-Penetrating Macrocycle for Efficient Cytosolic Delivery of Proteins, DNA and... by nmrlearner (2S,4S)-5-Fluoroleuc... by nmrlearner » NMR books Solid State Properties of Pharmaceutical Materials by nmrlearner NMR Data Interpretation Explained: Understanding 1D and 2D NMR Spectra of Organic Compounds and... by nmrlearner Guide to Fluorine NMR for Organic Chemists, 2nd Edition by nmrlearner » NMR theses A Pulse NMR Trilogy: Anomalies, Anisotropies, and Adsorption by nmrlearner NMR imaging of solids with multiple-pulse line narrowing and radiofrequency gradients by nmrlearner Metabolic engineering applications of in vivo [superscript 31]P and [superscript 13]C NMR studies... by nmrlearner » NMR blogs New blog site by nmrlearner EasySpin Academy (online), Oct 13-15, 2020 by nmrlearner A compact X-Band ODNP spectrometer towards hyperpolarized 1H spectroscopy #DNPNMR #ODNP by nmrlearner » NMR news Bruker Introduces Novel NMR Scientific Capabilities for Structural Biology Discoveries in Membrane... by nmrlearner Probing Microenvironmental Acidity in Lyophilized Protein and Vaccine Formulations Using... by nmrlearner Solution NMR investigations of integral membrane proteins: Challenges and innovations -... by nmrlearner » NMR tweets NMR tweet Hyperpolarized diamond nuclei increase NMR/MRI sensitivity: Today?s nuclear magnetic... by nmrlearner Hyperpolarized diamond nuclei increase NMR/MRI sensitivity: Today?s nuclear magnetic resonance... by nmrlearner iNMR enables you to process and visualize Nuclear Magnetic Resonance spectra. Have you been longing... by nmrlearner » NMR videos Jack Vale Interview | NMR Feature by nmrlearner NMR Made Easy! Part 6A - NMR to Molecule Structure - Organic Chemistry by nmrlearner Another introduction to proton NMR (9) by nmrlearner » NMR pictures butanone by nmrlearner ... temporal lobe epilepsy: a 1 H magnetic resonance spectroscopy study by nmrlearner Figure 12. Closed field magnetic resonance imaging machine [16]. by nmrlearner » Online Users: 220 0 members and 220 guests No Members online Most users ever online was 1,278, 01-09-2024 at 07:38 AM.

» Welcome! Welcome, NMR world! Our visitors map. » Log in User Name Remember Me? Not a member yet? Register Now! Password Diamond Rotors Could Put a New Spin on Protein Studies - IEEE Spectrum Jun 08, 2023 - 9:28 PM - by nmrlearner Diamond Rotors Could Put a New Spin on Protein Studies - IEEE Spectrum Diamond Rotors Could Put a New Spin on Protein Studies IEEE Spectrum Read here 0 Replies | 187 Views G-quadruplexes rescuing protein folding - pnas.org Jun 08, 2023 - 9:28 PM - by nmrlearner G-quadruplexes rescuing protein folding - pnas.org G-quadruplexes rescuing protein folding pnas.org Read here 0 Replies | 158 Views A method for parallel microscale protein labeling and precise control ... - Nature.com Jun 08, 2023 - 9:28 PM - by nmrlearner A method for parallel microscale protein labeling and precise control ... - Nature.com A method for parallel microscale protein labeling and precise control ... Nature.com Read here 0 Replies | 147 Views [NMR paper] Efficient 18.8*T MAS-DNP NMR reveals hidden side chains in amyloid fibrils Jun 08, 2023 - 9:28 PM - by nmrlearner Efficient 18.8*T MAS-DNP NMR reveals hidden side chains in amyloid fibrils Amyloid fibrils are large and insoluble protein assemblies composed of a rigid core associated with a cross-? arrangement rich in ?-sheet structural elements. It has been widely observed in solid-state NMR experiments that semi-rigid protein segments or side chains do not yield easily observable NMR signals at room temperature. The reasons for the missing peaks may be due to the presence of unfavorable dynamics that interfere with NMR experiments, which result in very weak or unobservable NMR... More... 0 Replies | 144 Views [NMR paper] 1H-detected characterization of carbon-carbon networks in highly flexible protonated biomolecules using MAS NMR Jun 08, 2023 - 9:28 PM - by nmrlearner 1H-detected characterization of carbon-carbon networks in highly flexible protonated biomolecules using MAS NMR In the last three decades, the scope of solid-state NMR has expanded to exploring complex biomolecules, from large protein assemblies to intact cells at atomic-level resolution. This diversity in macromolecules frequently features highly flexible components whose insoluble environment precludes the use of solution NMR to study their structure and interactions. While High-resolution Magic-Angle Spinning (HR-MAS) probes offer the capacity for gradient-based ¹H-detected spectroscopy in solids, such... More... 0 Replies | 121 Views [NMR paper] ARCHE-NOAH: NMR supersequence with five different CEST experiments for studying protein conformational dynamics Jun 08, 2023 - 9:28 PM - by nmrlearner ARCHE-NOAH: NMR supersequence with five different CEST experiments for studying protein conformational dynamics An NMR NOAH-supersequence is presented consisting of five CEST experiments for studying protein backbone and side-chain dynamics by ^(15)N-CEST, carbonyl-^(13)CO-CEST, aromatic-^(13)C(ar)-CEST, ^(13)C(?)-CEST, and methyl-^(13)C(met)-CEST. The new sequence acquires the data for these experiments in a fraction of the time required for the individual experiments, saving over four days of NMR time per sample. More... 0 Replies | 130 Views [ASAP] Solution Structure Ensembles of the Open and Closed Forms of the ~130 kDa Enzyme I via AlphaFold Modeling, Coarse Grained Simulations, and NMR Jun 07, 2023 - 11:06 AM - by nmrlearner [ASAP] Solution Structure Ensembles of the Open and Closed Forms of the ~130 kDa Enzyme I via AlphaFold Modeling, Coarse Grained Simulations, and NMR Sergey L. Sedinkin, Daniel Burns, Divyanshu Shukla, Davit A. Potoyan, and Vincenzo Venditti Journal of the American Chemical Society DOI: 10.1021/jacs.3c03425 Source: Journal of the American Chemical Society 0 Replies | 220 Views [NMR paper] Fitting Force Field Parameters to NMR Relaxation Data Jun 06, 2023 - 9:06 PM - by nmrlearner Fitting Force Field Parameters to NMR Relaxation Data We present an approach to optimize force field parameters using time-dependent data from NMR relaxation experiments. To do so, we scan parameters in the dihedral angle potential energy terms describing the rotation of the methyl groups in proteins and compare NMR relaxation rates calculated from molecular dynamics simulations with the modified force fields to deuterium relaxation measurements of T4 lysozyme. We find that a small modification of C^(?) methyl groups improves the agreement with... More... 0 Replies | 129 Views Page 86 of 100 « First < 36 76 84 85 86 87 88 96 > Last »

» Search Forums » Advanced Search » BioNMR wiki NMR job online resources by nmrlearner List of Linux distributions that offer easy PyMol installation via a package manager by markber Compiling and installing MolMol under Linux from Louic S. Vermeer blog by markber » NMR discussion Journal Highlight: 3D printed NMR spectra: From 1D and 2D acquisition to 3D visualization by nmrlearner Golden probe: Opening the cluster by nmrlearner Journal Highlight: Explosive emulsion characterisation using nuclear magnetic resonance by nmrlearner » NMR conferences PANIC 2018 - Practical Applications of NMR in Industry Conference by nmrlearner Practical Applications of NMR in Industry Conference (PANIC) by nmrlearner PANIC 2016 - Practical Applications of NMR in Industry Conference by nmrlearner » NMR software A source of RPMs for several NMR-related programs by nmrlearner New File Added: GARANT by Chris. Bart. Basics of Mathematica to Understand POMA by nmrlearner » Pulse sequences Pulse programs by sivanmr Bruker GFT-NMR pulse programs from Dr. Gao website by nmrlearner BMRB library of Bruker pulse sequences by nmrlearner » NMR community NMR Group of Gary Shaw at the University of Western Ontario by mrevingt "Eureka moments" push U of A researcher to top publishing spot - The Gateway Online by nmrlearner Prof. Konstantin Pervushin's NMR group by markber » NMR presentations Humans, aliens, and eHarmony or why there is no such thing as a free lunch in protein structure... by markber » NMR web resources NMR and MRI related tools and short programs by nmrlearner Advanced NMR Spectroscopy by nmrlearner Understanding NMR Spectroscopy - The Solutions and Figures by nmrlearner » NMR feature requests Are you interested in further development of PPT-DB: the protein property prediction and testing... by markber » NMR bookmarks Aldrich library of NMR spectra by nmrlearner NMR spectra of polymers and polymer additives by nmrlearner nmr basics by nmrlearner » Stats Members: 3,202 Threads: 25,792 Posts: 26,178 Top Poster: nmrlearner (23,236) Welcome to our newest member, bpadmanabhan