NMR tweet Q on X-Ray diffraction vs. 3D Nuclear Magnetic Resonance and Q on the Protein Database, just about winged them I hope.

		BioNMR > NMR community > Twitter NMR
$Q on X-Ray diffraction vs. 3D Nuclear Magnetic Resonance and Q on the Protein Database, just about winged them I hope.$ [NMR tweet] Q on X-Ray diffraction vs. 3D Nuclear Magnetic Resonance and Q on the Protein Database, just about winged them I hope.

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

08-13-2012, 04:35 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Q on X-Ray diffraction vs. 3D Nuclear Magnetic Resonance and Q on the Protein Database, just about winged them I hope.

Q on X-Ray diffraction vs. 3D Nuclear Magnetic Resonance and Q on the Protein Database, just about winged them I hope.

Published by SteveFoott (Stephen Foott) on 2012-08-13T15:57:43Z

Source: Twitter

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMR tweet] Stepping into the world of tin nuclear magnetic resonance today. hope it doesn't violate me Stepping into the world of tin nuclear magnetic resonance today. hope it doesn't violate me Published by bryan_lucier (Bryan Lucier) on 2011-04-26T13:20:42Z Source: Twitter	nmrlearner	Twitter NMR	0	04-26-2011 01:23 PM
[NMR tweet] MavenSemantic.com: Nuclear Magnetic Resonance Database Update http://bit.ly/fttmR1 MavenSemantic.com: Nuclear Magnetic Resonance Database Update http://bit.ly/fttmR1 Published by mavensemantic (Maven Semantic) on 2011-01-18T20:26:53Z Source: Twitter	nmrlearner	Twitter NMR	0	01-18-2011 08:36 PM
[NMR tweet] Maven Semantic: Nuclear Magnetic Resonance Database: The new database is now available to marketing, business development, competitor... Maven Semantic: Nuclear Magnetic Resonance Database: The new database is now available to marketing, business development, competitor... Published by Cheryl_Gates (Cheryl Gates) on 2011-01-18T14:33:38Z Source: Twitter	nmrlearner	Twitter NMR	0	01-18-2011 03:01 PM
[NMR tweet] Maven Semantic: Nuclear Magnetic Resonance Database: Inc Amgen Inc Aventis Pharma Deutschland GmbH Banyu Pharmac... http://bit.ly/fIGpbK Maven Semantic: Nuclear Magnetic Resonance Database: Inc Amgen Inc Aventis Pharma Deutschland GmbH Banyu Pharmac... http://bit.ly/fIGpbK Published by justretailwhole (Erin Kennedy) on 2011-01-18T13:29:38Z Source: Twitter	nmrlearner	Twitter NMR	0	01-18-2011 01:54 PM
[NMR tweet] BioPortfolio News Maven Semantic Nuclear Magnetic Resonance Database http://bit.ly/hdgA63 BioPortfolio News BioPortfolio News Maven Semantic Nuclear Magnetic Resonance Database http://bit.ly/hdgA63 BioPortfolio News Published by BioPressRelease (BioPortfolio) on 2011-01-18T11:36:23Z Source: Twitter	nmrlearner	Twitter NMR	0	01-18-2011 11:41 AM
[NMR paper] NMR assignments of the winged-helix domain of human werner syndrome protein. NMR assignments of the winged-helix domain of human werner syndrome protein. Related Articles NMR assignments of the winged-helix domain of human werner syndrome protein. J Biomol NMR. 2005 Jul;32(3):261 Authors: Sun JZ, Feng HQ, Lin GX, Zeng W, Hu JS	nmrlearner	Journal club	0	12-01-2010 06:56 PM
[NMR paper] On deriving spatial protein structure from NMR or X-ray diffraction data. On deriving spatial protein structure from NMR or X-ray diffraction data. Related Articles On deriving spatial protein structure from NMR or X-ray diffraction data. Ciba Found Symp. 1991;161:150-9; discussion 159-66 Authors: van Gunsteren WF, Gros P, Torda AE, Berendsen HJ, van Schaik RC During the last decade it has become possible to derive the spatial structure of small proteins in solution using multidimensional NMR spectroscopy measurements and interpreting the data in terms of a chemical atomic model. The NMR experiments generate a set...	nmrlearner	Journal club	0	08-21-2010 11:16 PM
[NMR paper] Dynamic DNA contacts observed in the NMR structure of winged helix protein-DNA comple Dynamic DNA contacts observed in the NMR structure of winged helix protein-DNA complex. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-PubMedLink.gif Related Articles Dynamic DNA contacts observed in the NMR structure of winged helix protein-DNA complex. J Mol Biol. 1999 Jun 18;289(4):683-90 Authors: Jin C, Marsden I, Chen X, Liao X Genesis is an HNF-3/fkh homologous protein. By using multi-dimensional NMR techniques, we have obtained the solution structure and backbone dynamics of Genesis complexed...	nmrlearner	Journal club	0	08-21-2010 04:03 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is Off Trackbacks are Off Pingbacks are Off Refbacks are Off