NMR tweet Is it Possible to Extract Brain Metabolic Pathways Information from In Vivo H Nuclear

		BioNMR > NMR community > Twitter NMR
[NMR tweet] Is it Possible to Extract Brain Metabolic Pathways Information from In Vivo H Nuclear

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

08-16-2010, 11:59 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Is it Possible to Extract Brain Metabolic Pathways Information from In Vivo H Nuclear

Is it Possible to Extract Brain Metabolic Pathways Information from In Vivo H Nuclear Magnetic Resonance Spectroscopy ? http://bit.ly/9fUMgB

Published by PhysicsPaper (New Physics Papers) on 2010-08-17T02:45:59Z

Source: Twitter

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Elucidating metabolic pathways for amino acid incorporation into dragline spider silk using 13C enrichment and solid state NMR. Elucidating metabolic pathways for amino acid incorporation into dragline spider silk using 13C enrichment and solid state NMR. Elucidating metabolic pathways for amino acid incorporation into dragline spider silk using 13C enrichment and solid state NMR. Comp Biochem Physiol A Mol Integr Physiol. 2011 Jul;159(3):219-24 Authors: Creager MS, Izdebski T, Brooks AE, Lewis RV Abstract Spider silk has been evolutionarily optimized for contextual mechanical performance over the last 400 Ma. Despite precisely balanced mechanical properties,...	nmrlearner	Journal club	0	09-02-2011 05:40 PM
In vivo oxygen-17 NMR for imaging brain oxygen metabolism at high field In vivo oxygen-17 NMR for imaging brain oxygen metabolism at high field Publication year: 2011 Source: Progress in Nuclear Magnetic Resonance Spectroscopy, In Press, Accepted Manuscript, Available online 23 April 2011</br> Xiao-Hong, Zhu , Wei, Chen</br> Highlights:? This article reviews the developments of in vivo 17O NMR imaging in brain research. ? In vivo 17O NMR imaging has improved significantly at high/ultrahigh field. ? In vivo 17O NMR can noninvasively image brain oxygen metabolism and perfusion. ? In vivo 17O NMR is useful for mapping the functional change in oxygen...	nmrlearner	Journal club	0	04-24-2011 03:42 PM
In Vivo NMR Metabolic Profiling of Fabrea salina Reveals Sequential Defense Mechanisms against Ultraviolet Radiation. In Vivo NMR Metabolic Profiling of Fabrea salina Reveals Sequential Defense Mechanisms against Ultraviolet Radiation. In Vivo NMR Metabolic Profiling of Fabrea salina Reveals Sequential Defense Mechanisms against Ultraviolet Radiation. Biophys J. 2011 Jan 5;100(1):215-24 Authors: Marangoni R, Paris D, Melck D, Fulgentini L, Colombetti G, Motta A Fabrea salina is a hypersaline ciliate that is known to be among the strongest ultraviolet (UV)-resistant microorganisms; however, the molecular mechanisms of this resistance are almost unknown. By means...	nmrlearner	Journal club	0	12-31-2010 07:03 PM
[NMR tweet] Is it Possible to Extract Metabolic Pathway Information from In Vivo H Nuclear Magnet Is it Possible to Extract Metabolic Pathway Information from In Vivo H Nuclear Magnetic Resonance Spectroscopy Data? - http://goo.gl/tPPb Published by abhishektiwari (Abhishek Tiwari) on 2010-10-17T12:00:12Z Source: Twitter	nmrlearner	Twitter NMR	0	10-17-2010 12:00 PM
[NMR thesis] Metabolic engineering applications of in vivo [superscript 31]P and [superscript 13]C Metabolic engineering applications of in vivo P and C NMR studies of Saccharomyces cerevisiae Shanks, Jacqueline Vanni (1989) Metabolic engineering applications of in vivo P and C NMR studies of Saccharomyces cerevisiae. Dissertation (Ph.D.), California Institute of Technology. http://resolver.caltech.edu/CaltechETD:etd-01242007-080430 More...	nmrlearner	NMR theses	0	08-27-2010 01:45 AM
[NMR paper] Quantitation of metabolic compartmentation in hyperammonemic brain by natural abundan Quantitation of metabolic compartmentation in hyperammonemic brain by natural abundance 13C-NMR detection of 13C-15N coupling patterns and isotopic shifts. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www3.interscience.wiley.com-aboutus-images-wiley_interscience_pubmed_logo_FREE_120x27.gif Related Articles Quantitation of metabolic compartmentation in hyperammonemic brain by natural abundance 13C-NMR detection of 13C-15N coupling patterns and isotopic shifts. Eur J Biochem. 1997 Feb 1;243(3):597-604 Authors: Lapidot A, Gopher A In...	nmrlearner	Journal club	0	08-22-2010 03:31 PM
[NMR paper] Quantitation of metabolic compartmentation in hyperammonemic brain by natural abundan Quantitation of metabolic compartmentation in hyperammonemic brain by natural abundance 13C-NMR detection of 13C-15N coupling patterns and isotopic shifts. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www3.interscience.wiley.com-aboutus-images-wiley_interscience_pubmed_logo_FREE_120x27.gif Related Articles Quantitation of metabolic compartmentation in hyperammonemic brain by natural abundance 13C-NMR detection of 13C-15N coupling patterns and isotopic shifts. Eur J Biochem. 1997 Feb 1;243(3):597-604 Authors: Lapidot A, Gopher A In...	nmrlearner	Journal club	0	08-22-2010 03:03 PM
[NMR paper] Validation of a noninvasive method to measure brain temperature in vivo using 1H NMR Validation of a noninvasive method to measure brain temperature in vivo using 1H NMR spectroscopy. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www3.interscience.wiley.com-aboutus-images-wiley_interscience_pubmed_logo_120x27.gif Related Articles Validation of a noninvasive method to measure brain temperature in vivo using 1H NMR spectroscopy. J Neurochem. 1995 Mar;64(3):1224-30 Authors: Corbett RJ, Laptook AR, Tollefsbol G, Kim B The goal of this study was to evaluate the potential of using the difference between the 1H NMR...	nmrlearner	Journal club	0	08-22-2010 03:41 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is Off Trackbacks are Off Pingbacks are Off Refbacks are Off