NMRwiki tweet nmrwiki: Why HCCH TOCSY does not work for whole aromatic side chains? #nmrhttp://qa.n

		BioNMR > NMR community > Twitter NMR
[NMRwiki tweet] nmrwiki: Why HCCH TOCSY does not work for whole aromatic side chains? #nmrhttp://qa.n

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

11-18-2010, 06:16 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,779

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

nmrwiki: Why HCCH TOCSY does not work for whole aromatic side chains? #nmrhttp://qa.n

nmrwiki: Why HCCH TOCSY does not work for whole aromatic side chains? #nmrhttp://qa.nmrwiki.org/question/199/

nmrwiki: Why HCCH TOCSY does not work for whole aromatic side chains? #nmrhttp://qa.nmrwiki.org/question/199/

Source: NMRWiki tweets

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[Question from NMRWiki Q&A forum] Calibrate HCCH-TOCSY spectrum with reference to HBHACONH Calibrate HCCH-TOCSY spectrum with reference to HBHACONH I am facing problems in calibration of my HCCH-TOCSY spectrum in reference to HBHACONH and HCCCONH spectrum. Can somebody tell me how to solve this issue? Can I autoassign my HCCH-TOCSY spectrum using HBHACONH spectrum Check if somebody has answered this question on NMRWiki QA forum	nmrlearner	News from other NMR forums	0	10-02-2011 08:25 AM
4D APSY-HBCB(CG)CDHD experiment for automated assignment of aromatic amino acid side chains in proteins 4D APSY-HBCB(CG)CDHD experiment for automated assignment of aromatic amino acid side chains in proteins Abstract A four-dimensional (4D) APSY (automated projection spectroscopy)-HBCB(CG)CDHD experiment is presented. This 4D experiment correlates aromatic with aliphatic carbon and proton resonances from the same amino acid side chain of proteins in aqueous solution. It thus allows unambiguous sequence-specific assignment of aromatic amino acid ring signals based on backbone assignments. Compared to conventional 2D approaches, the inclusion of evolution periods on 1Hβ and 13Cδ...	nmrlearner	Journal club	0	09-30-2011 08:01 PM
[NMRwiki tweet] nmrwiki: How does filtered NOE work? #nmrhttp://qa.nmrwiki.org/question/235/basics-of-filtered-noe-experiment nmrwiki: How does filtered NOE work? #nmrhttp://qa.nmrwiki.org/question/235/basics-of-filtered-noe-experiment nmrwiki: How does filtered NOE work? #nmrhttp://qa.nmrwiki.org/question/235/basics-of-filtered-noe-experiment Source: NMRWiki tweets	nmrlearner	Twitter NMR	0	03-04-2011 02:12 AM
[NMR paper] Optimization of three-dimensional TROSY-type HCCH NMR correlation of aromatic (1)H-(1 Optimization of three-dimensional TROSY-type HCCH NMR correlation of aromatic (1)H-(13)C groups in proteins. Related Articles Optimization of three-dimensional TROSY-type HCCH NMR correlation of aromatic (1)H-(13)C groups in proteins. J Magn Reson. 1999 Aug;139(2):447-50 Authors: Meissner A, Sorensen OW Improved methods for three-dimensional TROSY-Type HCCH correlation involving protons of negligible CSA are presented. The TROSY approach differs from the conventional approach of heteronuclear decoupling in evolution and detection periods by...	nmrlearner	Journal club	0	11-18-2010 08:31 PM
[Question from NMRWiki Q&A forum] HCCH-Tocsy connectivities HCCH-Tocsy connectivities What I see from this picture (linked from www.protein-nmr.org.uk): http://www.protein-nmr.org.uk/pictures/experiment_types/hcch_tocsy.png that shows an HCCH-TOCSY magnetisation transfer I do not see any transfer from HD to HB, but in my peaks I see a peak that seems it can be connected az Leu CB-HB2-HD22Can I have these peaks in HCCH-TOCSY? would you please introduce me a reference that tell me what kind of connection can be visible in HC(C)H-Tocsy	nmrlearner	News from other NMR forums	0	11-17-2010 06:08 PM
[NMRwiki tweet] nmrwiki: How does #nmr saturation transfer work?http://qa.nmrwiki.org/question/165/ nmrwiki: How does #nmr saturation transfer work?http://qa.nmrwiki.org/question/165/ nmrwiki: How does #nmr saturation transfer work?http://qa.nmrwiki.org/question/165/ Source: NMRWiki tweets	nmrlearner	Twitter NMR	0	08-27-2010 07:58 PM
[Nature network NMR forum] HCCH-TOCSY (0 replies) HCCH-TOCSY (0 replies) Hello everybody, I am a biologist who has jumped into NMR :( I hope this is an active forum so that I can improve myself and can help someday to others. I have a very stupid question!!! Do you know if I can see some HN peaks correlated with C-beta in HCCH-TOCSY? Cheers,	nmrlearner	News from other NMR forums	0	08-25-2010 02:58 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is Off Trackbacks are Off Pingbacks are Off Refbacks are Off