BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > Twitter NMR
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 11-02-2010, 11:22 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,733
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default nmrwiki: How to set up RAMA restraints for NIH-XPLOR? #nmr #structurehttp://qa.nmrwik

nmrwiki: How to set up RAMA restraints for NIH-XPLOR? #nmr #structurehttp://qa.nmrwiki.org/question/193/

nmrwiki: How to set up RAMA restraints for NIH-XPLOR? #nmr #structurehttp://qa.nmrwiki.org/question/193/

Source: NMRWiki tweets
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[NMRwiki tweet] nmrwiki: How to generate XPLOR distance restraints from pdb file? #nmrhttp://qa.nmrwiki.org/question/253/
nmrwiki: How to generate XPLOR distance restraints from pdb file? #nmrhttp://qa.nmrwiki.org/question/253/ nmrwiki: How to generate XPLOR distance restraints from pdb file? #nmrhttp://qa.nmrwiki.org/question/253/ Source: NMRWiki tweets
nmrlearner Twitter NMR 0 04-25-2011 03:43 AM
Impact of (15)N R(2)/R(1) Relaxation Restraints on Molecular Size, Shape, and Bond Vector Orientation for NMR Protein Structure Determination with Sparse Distance Restraints.
Impact of (15)N R(2)/R(1) Relaxation Restraints on Molecular Size, Shape, and Bond Vector Orientation for NMR Protein Structure Determination with Sparse Distance Restraints. Impact of (15)N R(2)/R(1) Relaxation Restraints on Molecular Size, Shape, and Bond Vector Orientation for NMR Protein Structure Determination with Sparse Distance Restraints. J Am Chem Soc. 2011 Apr 4; Authors: Ryabov Y, Schwieters CD, Clore GM (15)N R(2)/R(1) relaxation data contain information on molecular shape and size as well as on bond vector orientations relative to...
nmrlearner Journal club 0 04-06-2011 10:54 AM
[NMRwiki tweet] nmrwiki: Trouble with RAMA restraints in NIH-XPLOR :(http://qa.nmrwiki.org/question/1
nmrwiki: Trouble with RAMA restraints in NIH-XPLOR :(http://qa.nmrwiki.org/question/193/ nmrwiki: Trouble with RAMA restraints in NIH-XPLOR :(http://qa.nmrwiki.org/question/193/ Source: NMRWiki tweets
nmrlearner Twitter NMR 0 11-18-2010 06:16 PM
[NMRwiki tweet] nmrwiki: Why do XPLOR #nmr structures sometimes explode?http://qa.nmrwiki.org/questio
nmrwiki: Why do XPLOR #nmr structures sometimes explode?http://qa.nmrwiki.org/question/192/ nmrwiki: Why do XPLOR #nmr structures sometimes explode?http://qa.nmrwiki.org/question/192/ Source: NMRWiki tweets
nmrlearner Twitter NMR 0 11-02-2010 11:22 PM
[Question from NMRWiki Q&A forum] How to set up RAMA database restraints for NIH-XPLOR (for peptide NMR structure calcu
How to set up RAMA database restraints for NIH-XPLOR (for peptide NMR structure calculation)? Hello, has anyone managed to set up RAMA restraints for NIH-XPLOR? For some reason I'm always getting E(RAMA)=0.000 in the output, that is the term is registered, but the the energy is always zero. Somehow either parameters for the interaction are assumed to be zero or there are no atoms that have those energy term... Thanks. In my sa.inp I've got the following setup: !(1) initial setupevaluate ($krama = 1.0) !intraresidue proteinevaluate ($kramalr = 0.15) !long range proteinevaluate...
nmrlearner News from other NMR forums 0 11-02-2010 11:22 PM
[NMRwiki tweet] nmrwiki: pls suggest a good 15N hsqc for 250 mM Guanidinium HCl #nmr http://qa.nmrwik
nmrwiki: pls suggest a good 15N hsqc for 250 mM Guanidinium HCl #nmr http://qa.nmrwiki.org/question/186/ nmrwiki: pls suggest a good 15N hsqc for 250 mM Guanidinium HCl #nmr http://qa.nmrwiki.org/question/186/ Source: NMRWiki tweets
nmrlearner Twitter NMR 0 10-23-2010 07:42 AM
[NMRwiki tweet] nmrwiki: How convert Xplor #nmr distance restraints to Amber?http://qa.nmrwiki.org/qu
nmrwiki: How convert Xplor #nmr distance restraints to Amber?http://qa.nmrwiki.org/question/179/ nmrwiki: How convert Xplor #nmr distance restraints to Amber?http://qa.nmrwiki.org/question/179/ Source: NMRWiki tweets
nmrlearner Twitter NMR 0 09-25-2010 07:47 AM
[NMRwiki tweet] nmrwiki: what can cause this problem in @bruker cosy #nmr experiment?http://qa.nmrwik
nmrwiki: what can cause this problem in @bruker cosy #nmr experiment?http://qa.nmrwiki.org/question/167/ nmrwiki: what can cause this problem in @bruker cosy #nmr experiment?http://qa.nmrwiki.org/question/167/ Source: NMRWiki tweets
nmrlearner Twitter NMR 0 09-01-2010 03:38 AM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 03:12 PM.


Map