NMR tweet Biophysical examination of proteins by nuclear magnetic resonance:Atomic structures of macromolecules in solution

		BioNMR > NMR community > Twitter NMR
[NMR tweet] Biophysical examination of proteins by nuclear magnetic resonance:Atomic structures of macromolecules in solution

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

12-24-2011, 12:27 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,779

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Biophysical examination of proteins by nuclear magnetic resonance:Atomic structures of macromolecules in solution

Biophysical examination of proteins by nuclear magnetic resonance:Atomic structures of macromolecules in solution

Published by Theanphropy (James-N LEE-ANGEL) on 2011-12-24T00:17:57Z

Source: Twitter

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Uncovering symmetry-breaking vector and reliability order for assigning secondary structures of proteins from atomic NMR chemical shifts in amino acids Uncovering symmetry-breaking vector and reliability order for assigning secondary structures of proteins from atomic NMR chemical shifts in amino acids Abstract Unravelling the complex correlation between chemical shifts of 13 C Î±, 13 C Î², 13 Câ?², 1 H Î±, 15 N, 1 H N atoms in amino acids of proteins from NMR experiment and local structural environments of amino acids facilitates the assignment of secondary structures of proteins. This is an important impetus for both determining the three-dimensional structure and understanding the biological function of proteins. The previous...	nmrlearner	Journal club	0	11-14-2011 08:45 AM
[NMR tweet] nuclear magnetic resonance (NMR) is used to determine structures, it yields info on dynamics of proteins nuclear magnetic resonance (NMR) is used to determine structures, it yields info on dynamics of proteins Published by Abbkr (Sadeeq sheshe) on 2011-08-05T20:01:29Z Source: Twitter	nmrlearner	Twitter NMR	1	08-23-2011 02:49 AM
[NMR tweet] Nuclear Magnetic Resonance of Biological Macromolecules, Part C, Volume 394: Methods in Enzymology: http://amzn.to/iweEPk Nuclear Magnetic Resonance of Biological Macromolecules, Part C, Volume 394: Methods in Enzymology: http://amzn.to/iweEPk Published by Shandrakimp (Shandra Feith) on 2011-05-19T10:25:12Z Source: Twitter	nmrlearner	Twitter NMR	0	05-19-2011 10:51 AM
[NMR tweet] 10 Questions for Biophysical Chemist: Wendy Shaw: WS: Nuclear Magnetic Resonance in PNNL's High-Field Magnetic R... http://bit.ly/kE1SLS 10 Questions for Biophysical Chemist: Wendy Shaw: WS: Nuclear Magnetic Resonance in PNNL's High-Field Magnetic R... http://bit.ly/kE1SLS Published by Sun_raven (sun raven) on 2011-05-12T21:44:02Z Source: Twitter	nmrlearner	Twitter NMR	0	05-12-2011 09:50 PM
[NMR tweet] 10 Questions for Biophysical Chemist: Wendy Shaw: WS: Nuclear Magnetic Resonance in PNNL's High-Field Magnetic R... http://bit.ly/kE1SLS 10 Questions for Biophysical Chemist: Wendy Shaw: WS: Nuclear Magnetic Resonance in PNNL's High-Field Magnetic R... http://bit.ly/kE1SLS Published by Sun_raven78 (Raven) on 2011-05-12T21:44:01Z Source: Twitter	nmrlearner	Twitter NMR	0	05-12-2011 09:50 PM
[NMR tweet] http://www.kinding.net/nuclear-magnetic-resonance-of-biological-macromolecules-part-c-volume-394-methods-in-enzymology.html #nuclear #ma http://www.kinding.net/nuclear-magnetic-resonance-of-biological-macromolecules-part-c-volume-394-methods-in-enzymology.html #nuclear #ma Published by kindingnet (Kind Ing) on 2011-03-26T21:00:20Z Source: Twitter	nmrlearner	Twitter NMR	0	03-26-2011 09:39 PM
[NMR tweet] @Michael_Haz It's like we're in the midst of a gigantic magnetic resonance absorption. Radiation makes nuclear spins flip at atomic level. @Michael_Haz It's like we're in the midst of a gigantic magnetic resonance absorption. Radiation makes nuclear spins flip at atomic level. Published by chickelit (Bruce B.) on 2011-02-09T19:11:44Z Source: Twitter	nmrlearner	Twitter NMR	0	02-09-2011 07:34 PM
Nuclear Magnetic Resonance of Biological Macromolecules - T.L. James (2005) Nuclear Magnetic Resonance of Biological Macromolecules, Part C, Volume 394: Methods in Enzymology By Thomas L. James (2005) Amazon book review The critically acclaimed laboratory standard, Methods in Enzymology, is one of the most highly respected publications in the field of biochemistry. Since 1955, each volume has been eagerly awaited, frequently consulted, and praised by researchers and reviewers alike. The series contains much material still relevant today - truly an essential publication for researchers in all fields of life sciences. Nuclear Magnetic Resonance of Biological...	spin doctor	Books	0	08-21-2008 04:54 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is Off Trackbacks are Off Pingbacks are Off Refbacks are Off