Editor's Corner
Assessing precision and accuracy of protein structures derived from NMR data
David A. Snyder 1 2, Aneerban Bhattacharya 1 2, Yuanpeng J. Huang 1 2, Gaetano T. Montelione 1 2 *
1Center for Advanced Biotechnology and Medicine, Department of Molecular Biology and Biochemistry, and Northeast Structural Genomics Consortium, Rutgers University, Piscataway, NJ 08854
2Department of Biochemistry and Molecular Biology, Robert Wood Johnson Medical School, Piscataway, NJ 08854
*Correspondence to Gaetano T. Montelione, CABM-Rutgers University, 679 Hoes Lane, Piscataway, NJ 08854
[NMR paper] Assessing precision and accuracy of protein structures derived from NMR data.
Assessing precision and accuracy of protein structures derived from NMR data.
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Proteins. 2005 Jun 1;59(4):655-61
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J Mol Biol. 2000 Nov 24;304(2):219-29
Authors: Katoh E, Hatta T, Shindo H, Ishii Y, Yamada H, Mizuno T, Yamazaki T
YhhP, a small protein of 81 amino acid residues encoded by the yhhP gene in the Escherichia coli database, is implicated in cell division although the precise biological function of this protein has not been yet...
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J Biomol NMR. 1997 Oct;10(3):279-82
Authors: Bagby S, Tong KI, Liu D, Alattia JR, Ikura M
A simple method has been developed for screening solution conditions to determine conditions under which a protein is soluble at the high concentrations typically used for NMR...
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[NMR paper] Accuracy and precision of NMR relaxation experiments and MD simulations for character
Accuracy and precision of NMR relaxation experiments and MD simulations for characterizing protein dynamics.
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Proteins. 1997 Aug;28(4):481-93
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Model-free parameters obtained from nuclear magnetic resonance (NMR) relaxation...
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[NMR paper] An assessment of the precision and accuracy of protein structures determined by NMR.
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J Mol Biol. 1994 Jun 24;239(5):601-7
Authors: Zhao D, Jardetzky O
We tested the dependence of the accuracy and precision of calculated NMR structures on the errors of the distance constraints...
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[NMR paper] An assessment of the precision and accuracy of protein structures determined by NMR.
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Biochemistry. 1993 Feb 16;32(6):1610-7
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A simple procedure is introduced for accurately defining the precision with which the Cartesian coordinates of any macromolecular structure are determined by nuclear Overhauser data. The method utilizes an ensemble of structures obtained from an array of...
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Precision and Accuracy of NMR Structures - PSI
Precision and Accuracy of NMR Structures - a presentation by the Protein Structure Initiative - is available to read from here:
http://journals.iucr.org/services/nmr/precision.pdf
More information about the PSI can be found here:
http://www.structuralgenomics.org/
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