Solid-State NMR Reveals Structural and Dynamical Properties of a Membrane-Anchored Electron-Carrier Protein, Cytochrome b5 Ulrich H. N. Dürr,Kazutoshi Yamamoto,Sang-Choul Im,Lucy Waskell,and Ayyalusamy Ramamoorthy*
*ramamoor@umich.edu Abstract:
Cytochrome b5 (cyt b5) is a membrane-anchored electron-carrier protein containing a heme in its soluble domain. It enhances the enzymatic turnover of selected members of the cytochrome P450 superfamily of catabolic enzymes, localized in the endoplasmic reticulum of liver cells. Remarkably, its -helical membrane-anchoring domain is indispensable for the cyt b5/cyt P450 interaction. Here, we present the first solid-state NMR studies on holo-cyt b5 in a membrane environment, namely, macroscopically oriented DMPC/DHPC bicelles. We have presented approaches to selectively investigate different domains of the protein using spectral editing NMR techniques that utilize the unique motional properties of each domain. Two-dimensional 1H-15N HIMSELF spectra showed PISA-wheel patterns reporting on the structure and dynamics of the membrane anchor of the protein.
Gelation mechanism and network structure of mixed solution of low- and high-acyl gell
Shingo Matsukawaa, , and Tokuko Watanabeb
aDepartment of Food Science and Technology, Tokyo University of Marine Science and Technology, 4-5-7 Konan, Minato-ku, Tokyo 108-8477, Japan
bDepartment of Home Economics, Aoyama Gakuin Women's Junior College, 4-4-25 Shibuya, Shibuya-ku, Tokyo 150-8366, Japan
Received 26 September 2006; accepted 25 October 2006. Available online 8 December 2006.
Abstract
The gelation mechanism and the change of the network structure during cooling of the mixed solution of high-acyl (HA) and low-acyl (LA) gellan (containing 0.5% HA gellan and 0.5% LA gellan; hereafter called “mixed solution”) were elucidated on the basis of the results of dynamic viscoelasticity, circular dichroism (CD), and NMR measurements, which provide information about the network formation, the structural change due to random coil-double helix (C–H) transition, and the chain mobility of gellan, respectively. It was demonstrated that HA gellan chains in the mixed solution underwent C–H transition individually to form a network structure at the transition temperature for 1% HA gellan solution (75 °C), where storage modulus G′ and loss modulus G″ were steeply increased and the chain mobility of the HA gellan was restricted. The structural change of the HA gellan chains proceeded gradually with further cooling. At 25 °C, which is the C–H transition temperature for 1% LA gellan solution, LA gellan chains in the mixed solution formed a double helix, where G′ and G″ were slightly increased and the chain mobility of LA gellan was restricted. The results suggest that the double helix formation involves only the same kind of gellan chains even in the mixed solution, and that LA gellan chains decrease the mobility and promote the double helix formation of HA gellan chains, and vice versa.
Proton Detected Solid-State NMR Reveals Intramembrane Polar Networks in a Seven-Helical Transmembrane Protein Proteorhodopsin.
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J Am Chem Soc. 2011 Sep 16;
Authors: Ward ME, Shi L, Lake EM, Krishnamurthy S, Hutchins H, Brown LS, Ladizhansky V
Abstract
We used high-resolution proton-detected multidimensional NMR to study the solvent-exposed parts of an integral seven-helical membrane proton pump proteorhodopsin...
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Molecular simulations and solid-state NMR investigate dynamical structure in rhodopsin activation.
Molecular simulations and solid-state NMR investigate dynamical structure in rhodopsin activation.
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Authors: Mertz B, Struts AV, Feller SE, Brown MF
Abstract
Rhodopsin has served as the primary model for studying G protein-coupled receptors (GPCRs)-the largest group in the human genome, and consequently a primary target for pharmaceutical development. Understanding the functions and activation mechanisms of...
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Solid-State NMR on a Large Multidomain Integral Membrane Protein: The Outer Membrane Protein Assembly Factor BamA.
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J Am Chem Soc. 2011 Mar 1;
Authors: Renault M, Bos MP, Tommassen J, Baldus M
Multidomain proteins constitute a large part of prokaryotic and eukaryotic proteomes and play fundamental roles in various physiological processes. However, their structural characterization is challenging because of their large size and...
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Solid-State NMR on a Large Multidomain Integral Membrane Protein: The Outer Membrane Protein Assembly Factor BamA
Solid-State NMR on a Large Multidomain Integral Membrane Protein: The Outer Membrane Protein Assembly Factor BamA
Marie Renault, Martine P. Bos, Jan Tommassen and Marc Baldus
http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/jacsat/0/jacsat.ahead-of-print/ja109469c/aop/images/medium/ja-2010-09469c_0004.gif
Journal of the American Chemical Society
DOI: 10.1021/ja109469c
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The structural and topological analysis of membrane-associated polypeptides by oriented solid-state NMR spectroscopy: Established concepts and novel developments.
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Solid-state NMR spectroscopy is a powerful technique for the investigation of membrane-associated peptides and proteins as well as their interactions with...
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12-15-2010 12:03 PM
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Several studies have demonstrated that it is viable to use microcrystalline preparations of water-soluble proteins as...
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In the presence of 0.5 M NaCl at pH 7.1, the Ca(2+)-free apo form of recombinant bovine alpha-lactalbumin (BLA) is sufficiently stabilised in its native state to give well-resolved NMR spectra at 20 degrees C....
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