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NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR
Page 1 of 20 1 2311 > Last »
Showing results 1 to 25 of 500
Search took 0.07 seconds. Search: Posts Made By: nmrlearner
Forum: Online News Today, 11:11 AM
Replies: 0
Views: 7
Posted By nmrlearner
Beyond Isotopic Labeling: Expanding the Reach of Protein-Detect NMR in Lead Discovery - ACS Publications

Beyond Isotopic Labeling: Expanding the Reach of Protein-Detect NMR in Lead Discovery - ACS Publications

Beyond Isotopic Labeling: Expanding the Reach of Protein-Detect NMR in Lead Discovery...
Forum: Online News Yesterday, 11:03 PM
Replies: 0
Views: 13
Posted By nmrlearner
Transverse relaxation-optimized NMR spectroscopy with the outer membrane protein OmpX in dihexanoyl phosphatidylcholine micelles - pnas.org

Transverse relaxation-optimized NMR spectroscopy with the outer membrane protein OmpX in dihexanoyl phosphatidylcholine micelles - pnas.org

Transverse relaxation-optimized NMR spectroscopy with...
Forum: Journal club Yesterday, 10:54 AM
Replies: 0
Views: 87
Posted By nmrlearner
Rational Design of Lanthanide-Binding Tags to Optimize Magnetic Anisotropy in Paramagnetic Protein NMR

Rational Design of Lanthanide-Binding Tags to Optimize Magnetic Anisotropy in Paramagnetic Protein NMR...
Forum: Journal club 03-10-2025, 09:32 PM
Replies: 0
Views: 56
Posted By nmrlearner
(1)H-NMR-Based Biochemometric Strategy to Identify Transient Receptor Potential Vanilloid 1-Stimulating Compounds from Alpinia officinarum Rhizome

(1)H-NMR-Based Biochemometric Strategy to Identify Transient Receptor Potential Vanilloid 1-Stimulating Compounds from Alpinia officinarum Rhizome...
Forum: Online News 03-10-2025, 09:32 PM
Replies: 0
Views: 17
Posted By nmrlearner
19F Dark-State Exchange Saturation Transfer NMR Reveals Reversible Formation of Protein-Specific Large Clusters in High-Concentration Protein Mixtures - ACS Publications

19F Dark-State Exchange Saturation Transfer NMR Reveals Reversible Formation of Protein-Specific Large Clusters in High-Concentration Protein Mixtures - ACS Publications

19F Dark-State Exchange...
Forum: Online News 03-10-2025, 09:32 AM
Replies: 0
Views: 24
Posted By nmrlearner
High-Resolution In Situ NMR Spectroscopy of Bacterial Envelope Proteins in Outer Membrane Vesicles - ACS Publications

High-Resolution In Situ NMR Spectroscopy of Bacterial Envelope Proteins in Outer Membrane Vesicles - ACS Publications

High-Resolution In Situ NMR Spectroscopy of Bacterial Envelope Proteins in...
Forum: Online News 03-10-2025, 09:32 AM
Replies: 0
Views: 22
Posted By nmrlearner
Consistent blind protein structure generation from NMR chemical shift data - pnas.org

Consistent blind protein structure generation from NMR chemical shift data - pnas.org

Consistent blind protein structure generation from NMR chemical shift data...
Forum: Online News 03-10-2025, 09:32 AM
Replies: 0
Views: 19
Posted By nmrlearner
Figure 2. 15 N-HSQC NMR spectra of WT and mutant DENV2C proteins.... - ResearchGate

Figure 2. 15 N-HSQC NMR spectra of WT and mutant DENV2C proteins.... - ResearchGate

Figure 2. 15 N-HSQC NMR spectra of WT and mutant DENV2C proteins.......
Forum: Journal club 03-10-2025, 09:32 AM
Replies: 0
Views: 43
Posted By nmrlearner
Improvement in protein HSQC spectra from addition of betaine

Improvement in protein HSQC spectra from addition of betaine (/article/10.1007/s10858-025-00463-0)

Addition of glycine betaine up to 1 M gave rise to increased intensity for some weak signals...
Forum: Journal club 03-09-2025, 09:20 PM
Replies: 0
Views: 20
Posted By nmrlearner
Optimized Preparation of Segmentally Labeled RNAs for NMR Structure Determination

Optimized Preparation of Segmentally Labeled RNAs for NMR Structure Determination...
Forum: Journal club 03-09-2025, 09:20 PM
Replies: 0
Views: 38
Posted By nmrlearner
Deep learning network for NMR spectra reconstruction in time-frequency domain and quality assessment

Deep learning network for NMR spectra reconstruction in time-frequency domain and quality assessment...
Forum: Online News 03-09-2025, 09:20 PM
Replies: 0
Views: 19
Posted By nmrlearner
Site-Specific Internal Motions in GB1 Protein Microcrystals Revealed by 3D - ACS Publications

Site-Specific Internal Motions in GB1 Protein Microcrystals Revealed by 3D - ACS Publications

Site-Specific Internal Motions in GB1 Protein Microcrystals Revealed by 3D...
Forum: Online News 03-09-2025, 09:12 AM
Replies: 0
Views: 21
Posted By nmrlearner
Structure of fully protonated proteins by proton-detected magic-angle spinning NMR - pnas.org

Structure of fully protonated proteins by proton-detected magic-angle spinning NMR - pnas.org

Structure of fully protonated proteins by proton-detected magic-angle spinning NMR...
Forum: Online News 03-09-2025, 09:12 AM
Replies: 0
Views: 29
Posted By nmrlearner
NMR structures of two designed proteins with high sequence identity but different fold and function - pnas.org

NMR structures of two designed proteins with high sequence identity but different fold and function - pnas.org

NMR structures of two designed proteins with high sequence identity but different...
Forum: Online News 03-09-2025, 09:12 AM
Replies: 0
Views: 21
Posted By nmrlearner
Protein NMR Structures Refined with Rosetta Have Higher Accuracy Relative to Corresponding X-ray Crystal Structures - ACS Publications

Protein NMR Structures Refined with Rosetta Have Higher Accuracy Relative to Corresponding X-ray Crystal Structures - ACS Publications

Protein NMR Structures Refined with Rosetta Have Higher...
Forum: Online News 03-08-2025, 01:15 AM
Replies: 0
Views: 28
Posted By nmrlearner
Protein folding and unfolding studied at atomic resolution by fast two-dimensional NMR spectroscopy - pnas.org

Protein folding and unfolding studied at atomic resolution by fast two-dimensional NMR spectroscopy - pnas.org

Protein folding and unfolding studied at atomic resolution by fast two-dimensional...
Forum: Journal club 03-07-2025, 04:49 AM
Replies: 0
Views: 167
Posted By nmrlearner
Exploring the biochemical landscape of bacterial medium with pyruvate as the exclusive carbon source for NMR studies

Exploring the biochemical landscape of bacterial medium with pyruvate as the exclusive carbon source for NMR studies...
Forum: Online News 03-06-2025, 04:47 PM
Replies: 0
Views: 28
Posted By nmrlearner
Assessment of prediction methods for protein structures determined by NMR in CASP14: Impact of AlphaFold2 - Wiley Online Library

Assessment of prediction methods for protein structures determined by NMR in CASP14: Impact of AlphaFold2 - Wiley Online Library

Assessment of prediction methods for protein structures determined...
Forum: Online News 03-06-2025, 04:47 PM
Replies: 0
Views: 27
Posted By nmrlearner
Integrated description of protein dynamics from room-temperature X-ray crystallography and NMR - pnas.org

Integrated description of protein dynamics from room-temperature X-ray crystallography and NMR - pnas.org

Integrated description of protein dynamics from room-temperature X-ray crystallography and...
Forum: Journal club 03-06-2025, 04:47 PM
Replies: 0
Views: 59
Posted By nmrlearner
Exploring the biochemical landscape of bacterial medium with pyruvate as the exclusive carbon source for NMR studies

Exploring the biochemical landscape of bacterial medium with pyruvate as the exclusive carbon source for NMR studies (/article/10.1007/s10858-025-00462-1)

The use of Escherichia coli for...
Forum: Online News 03-06-2025, 04:34 AM
Replies: 0
Views: 29
Posted By nmrlearner
Xplor-NIH: Better parameters and protocols for NMR protein structure determination - Wiley Online Library

Xplor-NIH: Better parameters and protocols for NMR protein structure determination - Wiley Online Library

Xplor-NIH: Better parameters and protocols for NMR protein structure determination...
Forum: Online News 03-05-2025, 02:05 PM
Replies: 0
Views: 29
Posted By nmrlearner
Protein NMR Structures Refined with Rosetta Have Higher Accuracy Relative to Corresponding X-ray Crystal Structures - ACS Publications

Protein NMR Structures Refined with Rosetta Have Higher Accuracy Relative to Corresponding X-ray Crystal Structures - ACS Publications

Protein NMR Structures Refined with Rosetta Have Higher...
Forum: Journal club 03-04-2025, 11:03 PM
Replies: 0
Views: 120
Posted By nmrlearner
Hidden structural states of proteins revealed by conformer selection with AlphaFold-NMR

Hidden structural states of proteins revealed by conformer selection with AlphaFold-NMR...
Forum: Journal club 03-04-2025, 10:31 AM
Replies: 0
Views: 66
Posted By nmrlearner
Assessment of the effects of dry and wet aging on dark-cutting Nellore beef meat by TD-NMR and (1)H NMR approaches

Assessment of the effects of dry and wet aging on dark-cutting Nellore beef meat by TD-NMR and (1)H NMR approaches...
Forum: Online News 03-03-2025, 10:17 PM
Replies: 0
Views: 35
Posted By nmrlearner
NMR analyzes protein as it folds - ACS Publications

NMR analyzes protein as it folds - ACS Publications

NMR analyzes protein as it folds...
Showing results 1 to 25 of 500
Page 1 of 20 1 2311 > Last »

 
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