UK Scientists Demonstrate Highly Detailed Two-Dimensional Mass Spec Method on ... - GenomeWeb

		BioNMR > NMR community > Online News
UK Scientists Demonstrate Highly Detailed Two-Dimensional Mass Spec Method on ... - GenomeWeb

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

01-11-2016, 03:57 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

UK Scientists Demonstrate Highly Detailed Two-Dimensional Mass Spec Method on ... - GenomeWeb

UK Scientists Demonstrate Highly Detailed Two-Dimensional Mass Spec Method on ...
GenomeWeb
The 2DMS technique was inspired by two-dimensional nuclear magnetic resonance more than 30 years ago. "In multidimensional NMR, what they do is modulate a signal and transfer that modulation and measure the signal itself," O'Connor said. "It has a ...

UK Scientists Demonstrate Highly Detailed Two-Dimensional Mass Spec Method on ... - GenomeWeb
More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Scientists 'go bananas' for new application of fruit protein as method for ... - The Michigan Daily Scientists 'go bananas' for new application of fruit protein as method for ... - The Michigan Daily <img alt="" height="1" width="1"> Scientists 'go bananas' for new application of fruit protein as method for ... The Michigan Daily Though Markovitz's team is focusing on the anti-influenza properties of the modified BanLec protein, they also found preliminary results suggesting it could be used to treat HIV, hepatitis C, Ebola and other viruses. â??One scenario we'd love to see but ... and more » Read here	nmrlearner	Online News	0	10-30-2015 02:37 PM
Two highly detailed maps of the human proteome released at same time Two highly detailed maps of the human proteome released at same time http://www.spectroscopynow.com/common/images/thumbnails/146483f269e.jpgTwo independent research collaborations have released highly detailed maps of the human proteome in the same publication, identifying a high proportion of the proteins encoded by the human genome. More...	nmrlearner	News from NMR blogs	0	05-29-2014 09:35 PM
Spectroscopy Introduction: Using NMR, IR, and Mass Spec in Organic Chemistry Spectroscopy Introduction: Using NMR, IR, and Mass Spec in Organic Chemistry http://i.ytimg.com/vi/QSztChmDY44/default.jpg Spectroscopy Introduction: Using NMR, IR, and Mass Spec in Organic Chemistry Download My Ebook: leah4sci.com leah4sci.com presents: Introduction to spectroscopy for your standard organic chemistry course with a quick overview of what to expect for the following: NMR - Nuclear Magnetic Resonance IR - Infrared Spectroscopy Mass Spec or Mass Spectroscopy Future videos will take you through the individual spectroscopy solving techniques with examples. View them here:...	nmrlearner	NMR educational videos	0	02-05-2013 09:31 AM
Mass Spec Dominating Protein Profiling - Genetic Engineering News <img alt="" height="1" width="1" /> Mass Spec Dominating Protein Profiling Genetic Engineering News â??In the field of proteomics today, the current methods of choice for molecular characterization are liquid chromatography combined with mass spectrometry, tandem mass spec, and nuclear magnetic resonance mass spectrometry,â?? said James Langridge, Ph.D., ... Mass Spec Dominating Protein Profiling - Genetic Engineering News More...	nmrlearner	Online News	0	09-01-2011 07:23 PM
[NMR tweet] @xtaldave the mass spec elves...? Thought that was goblins. Or are they on nuclear ma @xtaldave the mass spec elves...? Thought that was goblins. Or are they on nuclear magnetic resonance these days? Published by jaclong (James) on 2010-11-22T18:05:57Z Source: Twitter	nmrlearner	Twitter NMR	0	11-22-2010 06:13 PM
Two-dimensional heteronuclear saturation transfer difference NMR reveals detailed int Two-dimensional heteronuclear saturation transfer difference NMR reveals detailed integrin Î±vÎ²6 protein-peptide interactions. Related Articles Two-dimensional heteronuclear saturation transfer difference NMR reveals detailed integrin Î±vÎ²6 protein-peptide interactions. Chem Commun (Camb). 2010 Sep 13; Authors: Wagstaff JL, Vallath S, Marshall JF, Williamson RA, Howard MJ We report the first example of peptide-protein heteronuclear two-dimensional (2D) saturation transfer difference nuclear magnetic resonance (STD NMR). This method, resulting in...	nmrlearner	Journal club	0	09-15-2010 02:26 PM
Comparative NMR studies demonstrate profound differences between two viroporins: P7 o Comparative NMR studies demonstrate profound differences between two viroporins: P7 of HCV and Vpu of HIV-1. Related Articles Comparative NMR studies demonstrate profound differences between two viroporins: P7 of HCV and Vpu of HIV-1. Biochim Biophys Acta. 2010 Aug 18; Authors: Cook GA, Zhang H, Park SH, Wang Y, Opella SJ The p7 protein from hepatitis C virus and the Vpu protein from HIV-1 are members of the viroporin family of small viral membrane proteins. It is essential to determine their structures in order to obtain an understanding of their...	nmrlearner	Journal club	0	08-25-2010 02:04 PM
[NMR paper] Catalytic activity of the SH2 domain of human pp60c-src; evidence from NMR, mass spec Catalytic activity of the SH2 domain of human pp60c-src; evidence from NMR, mass spectrometry, site-directed mutagenesis and kinetic studies for an inherent phosphatase activity. Related Articles Catalytic activity of the SH2 domain of human pp60c-src; evidence from NMR, mass spectrometry, site-directed mutagenesis and kinetic studies for an inherent phosphatase activity. Biochemistry. 1995 Nov 21;34(46):15351-8 Authors: Boerner RJ, Consler TG, Gampe RT, Weigl D, Willard DH, Davis DG, Edison AM, Loganzo F, Kassel DB, Xu RX During solution...	nmrlearner	Journal club	0	08-22-2010 03:50 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off