Tackling infectious disease â?? one protein at a time - Medical Xpress

		BioNMR > NMR community > Online News
Tackling infectious disease â?? one protein at a time - Medical Xpress

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

06-10-2017, 05:21 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,732

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Tackling infectious disease â?? one protein at a time - Medical Xpress

Tackling infectious disease â?? one protein at a time - Medical Xpress

Medical Xpress

Tackling infectious disease â?? one protein at a time
Medical Xpress
Garry Buchko and colleagues used NMR to solve the structure of the protein, which is found in an infection often conveyed by ticks. Credit: SSGCID. This week the team reached a milestone, announcing that its scientists have solved the 3-D structure of ...

Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Tackling Infectious Disease, One Protein at a Time - Infection Control Today Tackling Infectious Disease, One Protein at a Time - Infection Control Today http://www.bionmr.com//t2.gstatic.com/images?q=tbn:ANd9GcSxQAQXF8Owx8hxW3zy9QmIb0u7KjyXApANQ9a5LTmgklzhuP7WY99jrVNsDJgqH2MswkZqNTUL Infection Control Today <img alt="" height="1" width="1"> Tackling Infectious Disease, One Protein at a Time Infection Control Today A protein in the micro-organism that causes giardiasis, which translates to nausea, abdominal pain, fatigue and other symptoms in hundreds of millions of ... and more »	nmrlearner	Online News	0	06-09-2017 09:13 AM
Tackling infectious disease, one protein at a time - Science Daily Tackling infectious disease, one protein at a time - Science Daily <img alt="" height="1" width="1"> Tackling infectious disease, one protein at a time Science Daily Instead, Buchko places the protein inside an NMR spectrometer and records information about the orientation, energy and other properties of all the atomic nuclei in the molecule. Then he interprets the information and feeds the thousands of pieces of ... and more » Read here	nmrlearner	Online News	0	06-08-2017 07:00 PM
The amyloid protein alpha-synuclein has been visualised in the cell for the first time - Medical Xpress The amyloid protein alpha-synuclein has been visualised in the cell for the first time - Medical Xpress http://www.bionmr.com//t2.gstatic.com/images?q=tbn:ANd9GcS9UjyJ8DXb-FoY-20X-NIjcDfjERVtYq9chNj-0CgY9D3nRl8SdgkiedqjlR7pLdKeKTwmXsAXDQ Medical Xpress <img alt="" height="1" width="1"> The amyloid protein alpha-synuclein has been visualised in the cell for the first time Medical Xpress This was made possible by a combination of nuclear magnetic resonance spectroscopy (NMR) and electron paramagnetic resonance spectroscopy (EPR), two procedures that make it possible to characterise the...	nmrlearner	Online News	0	01-26-2016 03:40 PM
Protein's structural shift offers clues to tumor suppression and other key ... - Medical Xpress Protein's structural shift offers clues to tumor suppression and other key ... - Medical Xpress <img alt="" height="1" width="1" /> Protein's structural shift offers clues to tumor suppression and other key ... Medical Xpress Using nuclear magnetic resonance (NMR) and other techniques, researchers identified a regulatory mechanism that prompted the NPM1 segment to partially or completely unfold into a single disordered strand of amino acids. The researchers believe that the ... Read here	nmrlearner	Online News	0	07-04-2014 08:28 PM
Sex hormone levels at midlife linked to heart disease risk in women - Medical Xpress http://www.bionmr.com//t2.gstatic.com/images?q=tbn:ANd9GcRUDeMZIlFDDeEiaumKKf6zLdOwHQWqp_iwIiRsupZbiWE9o-dzT__1kfd5JmwWsQ0zdgzkIqg Medical Xpress <img alt="" height="1" width="1" /> Sex hormone levels at midlife linked to heart disease risk in women Medical Xpress Dr. El Khoudary and her colleagues used nuclear magnetic resonance spectroscopy to measure the size, distribution and concentration of lipoproteins that carry cholesterol in the blood. The Pitt Public Health team found that as estrogen levels fall ... Sex hormone levels at midlife linked to heart disease risk in women -...	nmrlearner	Online News	0	06-29-2014 02:00 AM
The antioxidant role of proteins containing selenium - Medical Xpress http://www.bionmr.com//t3.gstatic.com/images?q=tbn:ANd9GcSFmjKJueH8sAToPwf6NTRqSMgpmXF5eN5IlNWIrF-aWjIE0gtwFZ4ekXGsw23ht2fak3YoJkNr Medical Xpress <img alt="" height="1" width="1" /> The antioxidant role of proteins containing selenium Medical Xpress Rozovsky and her team used mass spectrometry and nuclear magnetic resonance spectroscopy to study selenium in redox biology, which the journal called a new approach that deepens scientific understanding of the chemical properties involved. Rozovsky ... The antioxidant role of proteins containing selenium - Medical Xpress	nmrlearner	Online News	0	04-28-2014 10:34 PM
Researchers identify new protein markers that may improve understanding of ... - Medical Xpress Researchers identify new protein markers that may improve understanding of ... - Medical Xpress <img alt="" height="1" width="1" /> Researchers identify new protein markers that may improve understanding of ... Medical Xpress Testing for GlycA and GlycB by NMR spectroscopy uses signals that arise from the binding of glucose molecules to a variety of circulating inflammatory proteins, especially fibrinogen, Î±1-antichymotrypsin, haptoglobin-1, Î±1-antitrypsin, complement C3 ... and more » Read here	nmrlearner	Online News	0	03-30-2014 06:49 PM
Prion proteins responsible for Mad cow disease, Creutzfeld-Jakob disease - News-Medical.net Prion proteins responsible for Mad cow disease, Creutzfeld-Jakob disease - News-Medical.net <img alt="" height="1" width="1" /> Prion proteins responsible for Mad cow disease, Creutzfeld-Jakob disease News-Medical.net Kai Schlepckow and Harald Schwalbe at the Goethe University Frankfurt am Main have successfully used time-resolved NMR spectroscopic studies to follow what is happening to every individual amino acid as the prion protein molecules aggregateâ??an ... Read here	nmrlearner	Online News	0	08-16-2013 08:36 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off