BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > Online News
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 12-28-2023, 10:50 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,734
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Systems NMR: single-sample quantification of RNA, proteins and metabolites for biomolecular network analysis - Nature.com

Systems NMR: single-sample quantification of RNA, proteins and metabolites for biomolecular network analysis - Nature.com

Systems NMR: single-sample quantification of RNA, proteins and metabolites for biomolecular network analysis Nature.com Read here
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
Protein Crystallization & Crystallography Market 2021 | Analysis, Statistics, Regional, And Global Industry Forecast To 2027 – The Bisouv Network - The Bisouv Network
Protein Crystallization & Crystallography Market 2021 | Analysis, Statistics, Regional, And Global Industry Forecast To 2027 – The Bisouv Network - The Bisouv Network Protein Crystallization & Crystallography Market 2021 | Analysis, Statistics, Regional, And Global Industry Forecast To 2027 – The Bisouv Network The Bisouv Network Read here
nmrlearner Online News 0 04-02-2021 12:01 PM
Global Protein Trends & Technologies Market-Industry Analysis and Forecast (2020-2027) – The Bisouv Network - The Bisouv Network
Global Protein Trends & Technologies Market-Industry Analysis and Forecast (2020-2027) – The Bisouv Network The Bisouv Network Global Protein Trends & Technologies Market-Industry Analysis and Forecast (2020-2027) – The Bisouv Network - The Bisouv Network More...
nmrlearner Online News 0 03-26-2021 11:56 AM
Protein Crystallography Market: Introducing New Industry Dynamics Through SWOT Analysis 2020-2026 – The Bisouv Network - The Bisouv Network
Protein Crystallography Market: Introducing New Industry Dynamics Through SWOT Analysis 2020-2026 – The Bisouv Network - The Bisouv Network Protein Crystallography Market: Introducing New Industry Dynamics Through SWOT Analysis 2020-2026 – The Bisouv Network The Bisouv Network Read here
nmrlearner Online News 0 02-06-2021 01:18 AM
[NMR paper] Quantification of metabolites by NMR spectroscopy in the presence of protein.
Quantification of metabolites by NMR spectroscopy in the presence of protein. Related Articles Quantification of metabolites by NMR spectroscopy in the presence of protein. J Proteome Res. 2017 Mar 15;: Authors: Wallmeier J, Samol C, Ellmann L, Zacharias HU, Vogl FC, Garcia M, Dettmer K, Oefner PJ, Gronwald W Abstract The high reliability of NMR spectroscopy makes it an ideal tool for large-scale metabolomic studies. However, the complexity of biofluids and, in particular, the presence of macromolecules poses a significant...
nmrlearner Journal club 0 03-16-2017 06:36 PM
[NMR paper] CH3-specific NMR assignment of alanine, isoleucine, leucine and valine methyl groups in high molecular weight proteins using a single sample.
CH3-specific NMR assignment of alanine, isoleucine, leucine and valine methyl groups in high molecular weight proteins using a single sample. Related Articles CH3-specific NMR assignment of alanine, isoleucine, leucine and valine methyl groups in high molecular weight proteins using a single sample. J Biomol NMR. 2015 Nov 13; Authors: Kerfah R, Hamelin O, Boisbouvier J, Marion D Abstract A new strategy for the NMR assignment of aliphatic side-chains in large perdeuterated proteins is proposed. It involves an alternative isotopic...
nmrlearner Journal club 0 11-15-2015 07:55 PM
CH 3 -specific NMR assignment of alanine, isoleucine, leucine and valine methyl groups in high molecular weight proteins using a single sample
CH 3 -specific NMR assignment of alanine, isoleucine, leucine and valine methyl groups in high molecular weight proteins using a single sample Abstract A new strategy for the NMR assignment of aliphatic side-chains in large perdeuterated proteins is proposed. It involves an alternative isotopic labeling protocol, the use of an out-and-back 13Cā??13C TOCSY experiment ((H)C-TOCSY-C-TOCSY-(C)H) and an optimized non-uniform sampling protocol. It has long been known that the non-linearity of an aliphatic spin-system (for example Ile, Val, or Leu)...
nmrlearner Journal club 0 11-14-2015 03:37 PM
In vivo single-shot 13C spectroscopic imaging of hyperpolarized metabolites by spatiotemporal encoding
From The DNP-NMR Blog: In vivo single-shot 13C spectroscopic imaging of hyperpolarized metabolites by spatiotemporal encoding Schmidt, R., et al., In vivo single-shot 13C spectroscopic imaging of hyperpolarized metabolites by spatiotemporal encoding. J Magn Reson, 2014. 240(0): p. 8-15. http://www.ncbi.nlm.nih.gov/pubmed/24486720
nmrlearner News from NMR blogs 0 06-02-2014 10:02 PM
Students dive into 3-D proteins - Mother Nature Network
Students dive into 3-D proteins - Mother Nature Network <img alt="" height="1" width="1" /> Students dive into 3-D proteins Mother Nature Network For decades, with funding from the National Science Foundation (NSF), Hinton has used nuclear magnetic resonance (NMR) to look at protein structure and function. But he wanted to find a way to educate and engage students about his discoveries. ... and more &raquo; Read here
nmrlearner Online News 0 06-08-2011 01:20 AM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 01:06 AM.


Map