Study shows molecular details of HIV-1 assembly and viral envelope protein incorporation - News-Medical.Net

		BioNMR > NMR community > Online News
Study shows molecular details of HIV-1 assembly and viral envelope protein incorporation - News-Medical.Net

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

06-26-2022, 04:52 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,732

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Study shows molecular details of HIV-1 assembly and viral envelope protein incorporation - News-Medical.Net

Study shows molecular details of HIV-1 assembly and viral envelope protein incorporation - News-Medical.Net

Study shows molecular details of HIV-1 assembly and viral envelope protein incorporation News-Medical.Net Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Alzheimer's Disease: MIT Study Shows How Tau Protein Tangles Form - Gilmore Health News Alzheimer's Disease: MIT Study Shows How Tau Protein Tangles Form - Gilmore Health News Alzheimer's Disease: MIT Study Shows How Tau Protein Tangles Form Gilmore Health News Read here	nmrlearner	Online News	0	06-06-2022 03:01 PM
Molecular cage helps researchers to get atomic-level details of key cancer protein - News-Medical.net Molecular cage helps researchers to get atomic-level details of key cancer protein News-Medical.net Molecular cage helps researchers to get atomic-level details of key cancer protein - News-Medical.net More...	nmrlearner	Online News	0	02-21-2022 11:07 AM
Scientists study seven human coronavirus envelope proteins using topology prediction and molecular modeling - News-Medical.Net Scientists study seven human coronavirus envelope proteins using topology prediction and molecular modeling - News-Medical.Net Scientists study seven human coronavirus envelope proteins using topology prediction and molecular modeling News-Medical.Net Read here	nmrlearner	Online News	0	03-10-2021 04:53 PM
MIT researchers unravel the molecular structure of key coronavirus protein - News-Medical.Net MIT researchers unravel the molecular structure of key coronavirus protein - News-Medical.Net MIT researchers unravel the molecular structure of key coronavirus protein News-Medical.Net Read here	nmrlearner	Online News	0	11-13-2020 04:07 PM
[NMR paper] Sequential Protein Expression and Capsid Assembly In Cell: Towards the Study of Multi-Protein Viral Capsids Using Solid-State NMR Techniques. Sequential Protein Expression and Capsid Assembly In Cell: Towards the Study of Multi-Protein Viral Capsids Using Solid-State NMR Techniques. Related Articles Sequential Protein Expression and Capsid Assembly In Cell: Towards the Study of Multi-Protein Viral Capsids Using Solid-State NMR Techniques. Biochemistry. 2018 Feb 21;: Authors: Alphonse S, Itin B, Khayat R, Ghose R Abstract While solid-state NMR (ssNMR) has emerged as a powerful technique to study viral capsids, current studies are limited to capsids formed from single...	nmrlearner	Journal club	0	02-23-2018 03:44 AM
Novel use of EPR spectroscopy to study in vivo protein structure - News-Medical.net Novel use of EPR spectroscopy to study in vivo protein structure - News-Medical.net http://www.bionmr.com//t0.gstatic.com/images?q=tbn:ANd9GcR-TSHFK7vSbGNdpZJQpP9KcobZMFsdBIaF00_tgYfeSQCSib3oJ9dwgPj9ELRxg2cFClAG81w News-Medical.net <img alt="" height="1" width="1"> Novel use of EPR spectroscopy to study in vivo protein structure News-Medical.net More recently, increases in the sensitivity of NMR and the use of isotope labelling have enabled determinations of the atomic level structure and dynamics of proteins to be determined within living cells1. NMR has been used to determine the...	nmrlearner	Online News	0	03-16-2016 12:13 AM
Study finding could shed light on molecular mechanisms underlying Huntington's disease - News-Medical.net http://www.bionmr.com//t3.gstatic.com/images?q=tbn:ANd9GcQ4bPSiC2GxHh2tSrBv-yw0PP4aV7KUqSJA__VTst6Y-abi8OKMJ34YPc5XvnrcWZZ7f9dPIKE Science World Report <img alt="" height="1" width="1"> Study finding could shed light on molecular mechanisms underlying Huntington's disease News-Medical.net ... the process," he said. "Using advanced nuclear magnetic resonance spectroscopy, we were able to provide an unprecedented view of the internal structure of the protein clumps that form in the disease, which we hope will one day lead to new therapies ... Researchers Describe Brain Plaques Involved In...	nmrlearner	Online News	0	02-04-2016 11:46 AM
Study reveals molecular function of protein essential for replication of H5N1 ... - News-Medical.net Study reveals molecular function of protein essential for replication of H5N1 ... - News-Medical.net http://www.bionmr.com//t1.gstatic.com/images?q=tbn:ANd9GcQqQVkN2sOlkhvYowf7yXaO0RlhCYQZ_9zOSx7m7tG2kLZe9aCik1IvkvJcZVU-_BYhJS__lMZX News-Medical.net <img alt="" height="1" width="1"> Study reveals molecular function of protein essential for replication of H5N1 ... News-Medical.net An international collaboration of scientists from the CEA, CNRS, University Joseph Fourier, the EMBL and the ILL has revealed the molecular function of a protein essential for replication of H5N1 influenza...	nmrlearner	Online News	0	12-10-2015 05:49 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off