Spider silk proteins could be the key to future cancer therapies - Popular Science

		BioNMR > NMR community > Online News
Spider silk proteins could be the key to future cancer therapies - Popular Science

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

03-23-2022, 04:50 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Spider silk proteins could be the key to future cancer therapies - Popular Science

Spider silk proteins could be the key to future cancer therapies Popular Science
Spider silk proteins could be the key to future cancer therapies - Popular Science
More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Dynamics of silk proteins are key to outstanding stability of spider silk as biomaterial: Interdisciplinary study clarifies role of protein dynamics mediated by the amino acid methionine - Science Daily Dynamics of silk proteins are key to outstanding stability of spider silk as biomaterial: Interdisciplinary study clarifies role of protein dynamics mediated by the amino acid methionine - Science Daily Dynamics of silk proteins are key to outstanding stability of spider silk as biomaterial: Interdisciplinary study clarifies role of protein dynamics mediated by the amino acid methionine Science Daily Read here	nmrlearner	Online News	0	02-29-2020 09:52 PM
A Lipid-binding Protein is a Target for New Cancer Therapies - R & D Magazine A Lipid-binding Protein is a Target for New Cancer Therapies - R & D Magazine A Lipid-binding Protein is a Target for New Cancer Therapies R & D MagazineThe results identified a specific nook in the SET protein's shape that provides a snug fit for ceramide. Read here	nmrlearner	Online News	0	05-02-2019 06:55 PM
Protein Crystallization Market Popular Trends & Technological advancements to Watch Out for Near Future; Global Industry Analysis 2025 - New Daily Herald Protein Crystallization Market Popular Trends & Technological advancements to Watch Out for Near Future; Global Industry Analysis 2025 - New Daily Herald Protein Crystallization Market Popular Trends & Technological advancements to Watch Out for Near Future; Global Industry Analysis 2025 New Daily HeraldCrystallization is defined as the process which occurs naturally, or can be done artificially, where solid forms of atoms or molecules are organized in a structure ... Read here	nmrlearner	Online News	0	04-25-2019 05:39 PM
[NMR paper] Biomimicry of artificial spider silk spinning assessed by NMR Biomimicry of artificial spider silk spinning assessed by NMR Biomimetic spinning of artificial spider silk requires that the terminal domains of designed minispidroins undergo specific structural changes in concert with the ?-sheet conversion of the repetitive region. Here, we combine solution and solid state NMR methods to probe domain-specific structural changes in the NT2RepCT minispidroin, which allows us to assess the degree of biomimicry of artificial silk spinning. In addition, we show that the structural effects of post-spinning procedures can be examined. By studying the impact...	nmrlearner	Journal club	0	08-09-2017 09:26 AM
Arachnid Rapunzel: Researchers spin spider silk proteins into artificial silk - (e) Science News Arachnid Rapunzel: Researchers spin spider silk proteins into artificial silk - (e) Science News http://www.bionmr.com//t0.gstatic.com/images?q=tbn:ANd9GcRr_N95y_3k4uVB81DfIFgrFibP4sVEYf3t9tZgG9j9dVXLKH5CbficPDLAVrQhoOLzuZFxsKhI (e) Science News <img alt="" height="1" width="1"> Arachnid Rapunzel: Researchers spin spider silk proteins into artificial silk (e) Science News Jan Rainey's group at Dalhousie University used nuclear magnetic resonance (NMR) spectroscopy to analyze the structure of AcSp1's repeat sequence at very high resolution, producing one of the first spider silk repeat...	nmrlearner	Online News	0	02-12-2015 06:10 AM
Arachnid Rapunzel: Researchers spin spider silk proteins into artificial silk - Nanowerk Arachnid Rapunzel: Researchers spin spider silk proteins into artificial silk - Nanowerk http://www.bionmr.com//t1.gstatic.com/images?q=tbn:ANd9GcQOWTtIYCuZDjceklf47iupyefX8WwW65a7h21uZE7UoWLopYGYitzsPaI0uLriPC5sDeCwkRY Nanowerk <img alt="" height="1" width="1"> Arachnid Rapunzel: Researchers spin spider silk proteins into artificial silk Nanowerk Jan Rainey's group at Dalhousie University used nuclear magnetic resonance (NMR) spectroscopy to analyze the structure of AcSp1's repeat sequence at very high resolution, producing one of the first spider silk repeat unit structure sequences...	nmrlearner	Online News	0	02-11-2015 12:26 AM
Exploring the Backbone Dynamics of Native Spider Silk Proteins in Black Widow Silk Glands with Solution-state NMR Spectroscopy Exploring the Backbone Dynamics of Native Spider Silk Proteins in Black Widow Silk Glands with Solution-state NMR Spectroscopy Publication date: Available online 13 June 2014 Source:Polymer</br> Author(s): Dian Xu , Jeffery L. Yarger , Gregory P. Holland</br> Spider dragline silk is an outstanding biopolymer with a strength that exceeds steel by weight and a toughness greater than high-performance fibers like Kevlar. For this reason, understanding how a spider converts the gel-like, aqueous protein spinning dope within the major ampullate (MA) gland into a super...	nmrlearner	Journal club	0	06-14-2014 12:53 AM
[NMR paper] Amino Acid Analysis of spider dragline silk using (1)H NMR. Amino Acid Analysis of spider dragline silk using (1)H NMR. Related Articles Amino Acid Analysis of spider dragline silk using (1)H NMR. Anal Biochem. 2013 May 30; Authors: Shi X, Holland GP, Yarger JL Abstract The amino acid composition of N. clavipes dragline silk fiber is determined by conducting (1)H Nuclear Magnetic Resonance (NMR) spectroscopy experiments on acid hydrolyzed material. N. clavipes dragline silk was found to consist of 43.0±0.6% Gly, 29.3±0.2% Ala, 9.1±0.1% Glx, 4.0±0.1% Leu, 3.3±0.1% Tyr, 3.4 ±0.2% Ser, 2.7±0.1%...	nmrlearner	Journal club	0	06-04-2013 06:31 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off