Scientists reveal how an ancient biological clock works - UC Santa Cruz (press release)

		BioNMR > NMR community > Online News
Scientists reveal how an ancient biological clock works - UC Santa Cruz (press release)

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

03-17-2017, 08:02 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,732

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Scientists reveal how an ancient biological clock works - UC Santa Cruz (press release)

UC Santa Cruz (press release)

Scientists reveal how an ancient biological clock works
UC Santa Cruz (press release)
The researchers captured the clock proteins in large complexes and made spectroscopic â??snapshotsâ?? of their different formations using x-ray crystallography and nuclear magnetic resonance (NMR) spectroscopy. Their findings were published March 16 in ...

and more »

Scientists reveal how an ancient biological clock works - UC Santa Cruz (press release)
More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Scientists digitally mimic evolution to create novel proteins - EurekAlert (press release) Scientists digitally mimic evolution to create novel proteins - EurekAlert (press release) <img alt="" height="1" width="1"> Scientists digitally mimic evolution to create novel proteins EurekAlert (press release) He then tapped a number of different metrics to whittle down the list to the top 21 proteins, which he produced in the lab. Jacobs and colleagues took pictures of these proteins using x-ray crystallography and NMR, and found that the proteins contained ... and more » Read here	nmrlearner	Online News	0	05-10-2016 04:13 PM
Salk scientists uncover new clues to repairing an injured spinal cord - EurekAlert (press release) <img alt="" height="1" width="1" /> Salk scientists uncover new clues to repairing an injured spinal cord EurekAlert (press release) By studying the configurations of the proteins in solutions using nuclear magnetic resonance (NMR) technology, the researchers found that the growth-promoting p45 could disrupt the p75 pairing. "For reasons that are not understood, when p45 comes in, ... and more » Salk scientists uncover new clues to repairing an injured spinal cord - EurekAlert (press release) More...	nmrlearner	Online News	0	08-06-2014 07:59 AM
Scientists find new source of versatility so 'floppy' proteins can get things done - EurekAlert (press release) Scientists find new source of versatility so 'floppy' proteins can get things done - EurekAlert (press release) <img alt="" height="1" width="1" /> Scientists find new source of versatility so 'floppy' proteins can get things done EurekAlert (press release) But IDPs don't connect willy-nilly with other proteins, and scientists have wondered how they regulate their diverse interactions. Wright's laboratory and others have been studying these interactions using a technique called nuclear magnetic resonance ... Read here	nmrlearner	Online News	0	06-21-2013 12:16 AM
Scientists at UCSF Set New Cryo EM Resolution Benchmark in Structural Biology - GlobeNewswire (press release) <img alt="" height="1" width="1" /> Scientists at UCSF Set New Cryo EM Resolution Benchmark in Structural Biology GlobeNewswire (press release) Most atomic resolution protein structures come from X-ray crystallography, a technique that is limited to samples which can be crystalized, a challenging task that can sometimes take years of effort, and from nuclear magnetic resonance (NMR ... and more » Scientists at UCSF Set New Cryo EM Resolution Benchmark in Structural Biology - GlobeNewswire (press release) More...	nmrlearner	Online News	0	05-07-2013 12:31 AM
A new tool to reveal structure of proteins - Science Daily (press release) A new tool to reveal structure of proteins - Science Daily (press release) <img alt="" height="1" width="1" /> A new tool to reveal structure of proteins Science Daily (press release) For roughly a decade, a technique called solid state nuclear magnetic resonance (NMR) spectroscopy has allowed researchers to detect the arrangements of atoms in proteins that defy study by traditional laboratory tools such as X-ray crystallography. and more » Read here	nmrlearner	Online News	0	03-22-2012 12:50 PM
Scientists Paint New Picture of Dance Between Protein and Binding Partners - Science Daily (press release) Scientists Paint New Picture of Dance Between Protein and Binding Partners - Science Daily (press release) <img alt="" height="1" width="1" /> Scientists Paint New Picture of Dance Between Protein and Binding Partners Science Daily (press release) The new study -- which used a number of complementary technologies including NMR spectroscopy and hydrogen/deuterium exchange (HDX) coupled to mass spectrometery, combined with previous x-ray crystallography analyses -- provides detailed insights into ... and more » Read here	nmrlearner	Online News	0	01-23-2012 03:12 AM
Scripps Research scientists find E. coli enzyme must move to function - EurekAlert (press release) <img alt="" height="1" width="1" /> Scripps Research scientists find E. coli enzyme must move to function EurekAlert (press release) For the new study, the scientists turned to an imaging technique known as nuclear magnetic resonance (NMR) spectroscopy, in combination with X-ray crystallography. Unlike X-ray crystallography, a technique used to determine the structure of proteins in ... and more » Scripps Research scientists find E. coli enzyme must move to function - EurekAlert (press release) More...	nmrlearner	Online News	0	04-07-2011 11:40 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off