Scientists reveal dual specificity of Vav2-SH2 protein - Phys.org

		BioNMR > NMR community > Online News
Scientists reveal dual specificity of Vav2-SH2 protein - Phys.org

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

10-28-2020, 12:41 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,780

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Scientists reveal dual specificity of Vav2-SH2 protein - Phys.org

Scientists reveal dual specificity of Vav2-SH2 protein - Phys.org

Scientists reveal dual specificity of Vav2-SH2 protein Phys.org Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMR paper] Biochemical and NMR characterization of the interactions of Vav2-SH2 domain with lipids and the EphA2 juxtamembrane region on membrane. Biochemical and NMR characterization of the interactions of Vav2-SH2 domain with lipids and the EphA2 juxtamembrane region on membrane. http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/https:--portlandpress.com-images-pubmed-logo.png Related Articles Biochemical and NMR characterization of the interactions of Vav2-SH2 domain with lipids and the EphA2 juxtamembrane region on membrane. Biochem J. 2020 Sep 08;: Authors: Ge L, Wu B, Zhang Y, Wang J, Zhao H, Wang J Abstract Vav2 is a ubiquitous guanine nucleotide...	nmrlearner	Journal club	0	09-13-2020 09:18 AM
Scientists decode dynamics of the largest protein-degrading machine in atomic detail - Phys.Org Scientists decode dynamics of the largest protein-degrading machine in atomic detail Phys.OrgProtein nanomachines made of multiple protein molecules are highly dynamic during their actions on their functional targets, sometime called substrates. Scientists decode dynamics of the largest protein-degrading machine in atomic detail - Phys.Org More...	nmrlearner	Online News	0	03-28-2019 01:56 AM
Molecular details of protein reveal glimpse into how kidney stones form - Phys.Org Molecular details of protein reveal glimpse into how kidney stones form - Phys.Org Molecular details of protein reveal glimpse into how kidney stones form Phys.OrgKidney stones—solid, pebble-like grit that forms when too much of certain minerals like calcium are in the urine—can strike men, women, and increasingly, ... Read here	nmrlearner	Online News	0	01-07-2019 05:49 AM
Computer model may help scientists split up, reassemble proteins on command - Phys.org Computer model may help scientists split up, reassemble proteins on command - Phys.org Computer model may help scientists split up, reassemble proteins on command Phys.orgSplitting up and getting back together is always hard to do, but for proteins, it's almost impossible. Read here	nmrlearner	Online News	0	01-07-2019 05:49 AM
Scientists identify protein that may have existed when life began - Phys.org Scientists identify protein that may have existed when life began - Phys.org Scientists identify protein that may have existed when life began Phys.orgHow did life arise on Earth? Rutgers researchers have found among the first and perhaps only hard evidence that simple protein catalysts—essential for cells, ... Read here	nmrlearner	Online News	0	01-07-2019 05:49 AM
Team identifies universality and specificity in protein motions - Phys.Org <img alt="" height="1" width="1"> Team identifies universality and specificity in protein motions Phys.Org The researchers took starting structural information based on nuclear magnetic resonance or X-ray techniques, and simulated 14 behavioral dynamics in 12 proteins in times ranging from 50 nanoseconds to 1.23 milliseconds. In short, the researchers ... and more » Team identifies universality and specificity in protein motions - Phys.Org More...	nmrlearner	Online News	0	10-13-2017 06:49 AM
Scientists reveal how an ancient biological clock works - UC Santa Cruz (press release) http://www.bionmr.com//t2.gstatic.com/images?q=tbn:ANd9GcTxjrnJ54rCHBvkl1LCbKfhdjWZ3zZM-4U6pFgxXlo7_7dPeSa3dbHkZAeWKboGNb-3W5qTYzcF UC Santa Cruz (press release) <img alt="" height="1" width="1"> Scientists reveal how an ancient biological clock works UC Santa Cruz (press release) The researchers captured the clock proteins in large complexes and made spectroscopic â??snapshotsâ?? of their different formations using x-ray crystallography and nuclear magnetic resonance (NMR) spectroscopy. Their findings were published March 16 in ... and more » Scientists reveal how an ancient...	nmrlearner	Online News	0	03-17-2017 08:02 AM
Enhanced-sensitivity NMR could reveal new clues to how proteins fold - Phys.Org Enhanced-sensitivity NMR could reveal new clues to how proteins fold - Phys.Org http://www.bionmr.com//t1.gstatic.com/images?q=tbn:ANd9GcRv5kcqepdG7qJM0UMWGlFFd6B7LANvsM9YhElwPbgnXWRAEWGTHs3JS_oQLgMHS8kZCRwpmbo Phys.Org <img alt="" height="1" width="1"> Enhanced-sensitivity NMR could reveal new clues to how proteins fold Phys.Org Until now, it has been difficult to fully characterize the different structures that proteins can take on in their natural environments. However, using a new technique known as sensitivity-enhanced nuclear magnetic resonance (NMR), MIT researchers have ... ...	nmrlearner	Online News	0	10-09-2015 04:49 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off