Scientists 'go bananas' for new application of fruit protein as method for ... - The Michigan Daily

		BioNMR > NMR community > Online News
Scientists 'go bananas' for new application of fruit protein as method for ... - The Michigan Daily

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

10-30-2015, 02:37 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Scientists 'go bananas' for new application of fruit protein as method for ... - The Michigan Daily

Scientists 'go bananas' for new application of fruit protein as method for ... - The Michigan Daily

Scientists 'go bananas' for new application of fruit protein as method for ...
The Michigan Daily
Though Markovitz's team is focusing on the anti-influenza properties of the modified BanLec protein, they also found preliminary results suggesting it could be used to treat HIV, hepatitis C, Ebola and other viruses. â??One scenario we'd love to see but ...

and more »
Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMR paper] Elucidation of the CCR1- and CCR5-binding modes of MIP-1? by application of an NMR spectra reconstruction method to the transferred cross-saturation experiments. Elucidation of the CCR1- and CCR5-binding modes of MIP-1? by application of an NMR spectra reconstruction method to the transferred cross-saturation experiments. Related Articles Elucidation of the CCR1- and CCR5-binding modes of MIP-1? by application of an NMR spectra reconstruction method to the transferred cross-saturation experiments. J Biomol NMR. 2015 Oct 15; Authors: Yoshiura C, Ueda T, Kofuku Y, Matsumoto M, Okude J, Kondo K, Shiraishi Y, Shimada I Abstract C-C chemokine receptor 1 (CCR1) and CCR5 are involved in...	nmrlearner	Journal club	0	10-17-2015 03:40 PM
Elucidation of the CCR1- and CCR5-binding modes of MIP-1Î± by application of an NMR spectra reconstruction method to the transferred cross-saturation experiments Elucidation of the CCR1- and CCR5-binding modes of MIP-1Î± by application of an NMR spectra reconstruction method to the transferred cross-saturation experiments Abstract Câ??C chemokine receptor 1 (CCR1) and CCR5 are involved in various inflammation and immune responses, and regulate the progression of the autoimmune diseases differently. However, the number of residues identified at the binding interface was not sufficient to clarify the differences in the CCR1- and CCR5-binding modes to MIP-1Î±, because the NMR measurement time for CCR1 and CCR5...	nmrlearner	Journal club	0	10-15-2015 12:19 PM
[NMR images] Diagram courtesy of Michigan State University Chemistry Department http://students.ycp.edu/~nbirth/spctrmtr.gif students.ycp.edu 16/07/2013 8:13:24 AM GMT Diagram courtesy of Michigan State University Chemistry Department More...	nmrlearner	NMR pictures	0	07-28-2013 07:11 AM
Scientists Discover Structure of Protein Essential for Quality Control, Nerve ... - Science Daily (press release) Scientists Discover Structure of Protein Essential for Quality Control, Nerve ... - Science Daily (press release) <img alt="" height="1" width="1" /> Scientists Discover Structure of Protein Essential for Quality Control, Nerve ... Science Daily (press release) Ltn1 was deemed too large for its structure to be determined by current nuclear magnetic resonance (NMR) technology, and, as the scientists know now, too flexible to allow the highly regular crystalline packing needed by X-ray crystallographers. "It's ... and more » Read here	nmrlearner	Online News	0	01-15-2013 10:56 AM
Convenient method for resolving degeneracies due to symmetry of the magnetic susceptibility tensor and its application to pseudo contact shift-based proteinâ??protein complex structure determination Convenient method for resolving degeneracies due to symmetry of the magnetic susceptibility tensor and its application to pseudo contact shift-based proteinâ??protein complex structure determination Abstract Pseudo contact shifts (PCSs) induced by paramagnetic lanthanide ions fixed in a protein frame provide long-range distance and angular information, and are valuable for the structure determination of proteinâ??protein and proteinâ??ligand complexes. We have been developing a lanthanide-binding peptide tag (hereafter LBT) anchored at two points via a peptide bond and a disulfide ...	nmrlearner	Journal club	0	04-12-2012 06:12 AM
Scientists Paint New Picture of Dance Between Protein and Binding Partners - Science Daily (press release) Scientists Paint New Picture of Dance Between Protein and Binding Partners - Science Daily (press release) <img alt="" height="1" width="1" /> Scientists Paint New Picture of Dance Between Protein and Binding Partners Science Daily (press release) The new study -- which used a number of complementary technologies including NMR spectroscopy and hydrogen/deuterium exchange (HDX) coupled to mass spectrometery, combined with previous x-ray crystallography analyses -- provides detailed insights into ... and more » Read here	nmrlearner	Online News	0	01-23-2012 03:12 AM
New method reveals protein structure - The Brown Daily Herald <img alt="" height="1" width="1" /> New method reveals protein structure The Brown Daily Herald Their new method for determining protein structure integrates small-angle X-ray scattering and nuclear magnetic resonance spectroscopy, allowing a greater level of detail and representing "a new wavefront of biology," said Dorothy Koveal GS, ... New method reveals protein structure - The Brown Daily Herald More...	nmrlearner	Online News	0	11-11-2011 08:26 AM
Scientists uncover small molecules that may prevent ebola infection : Study - Medical Daily <img alt="" height="1" width="1" /> Scientists uncover small molecules that may prevent ebola infection : Study Medical Daily Exactly how and where these small molecules bind to the virus's protein coat is now being determined through nuclear magnetic resonance spectroscopy, ... Scientists uncover small molecules that may prevent ebola infection : Study - Medical Daily More...	nmrlearner	Online News	0	01-26-2011 04:27 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off