SARS-CoV-2: The grasping fingers of the viral N protein - EurekAlert

		BioNMR > NMR community > Online News
SARS-CoV-2: The grasping fingers of the viral N protein - EurekAlert

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

08-23-2023, 10:11 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,734

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

SARS-CoV-2: The grasping fingers of the viral N protein - EurekAlert

SARS-CoV-2: The grasping fingers of the viral N protein EurekAlert
SARS-CoV-2: The grasping fingers of the viral N protein - EurekAlert
More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Covid: Viral N Protein's Grasping Fingers Uncovered - Mirage News Covid: Viral N Protein's Grasping Fingers Uncovered - Mirage News Covid: Viral N Protein's Grasping Fingers Uncovered Mirage News Read here	nmrlearner	Online News	0	08-21-2023 07:58 PM
The SARS-CoV-2 nucleocapsid protein: its role in the viral life cycle ... - Virology Journal The SARS-CoV-2 nucleocapsid protein: its role in the viral life cycle ... - Virology Journal The SARS-CoV-2 nucleocapsid protein: its role in the viral life cycle ... Virology Journal Read here	nmrlearner	Online News	0	01-12-2023 02:17 PM
A Structurally Conserved RNA Element within SARS-CoV-2 ORF1a RNA and S mRNA Regulates Translation in Response to Viral S Protein-Induced Signaling in Human Lung Cells \| Journal of Virology - Journal of Virology A Structurally Conserved RNA Element within SARS-CoV-2 ORF1a RNA and S mRNA Regulates Translation in Response to Viral S Protein-Induced Signaling in Human Lung Cells \| Journal of Virology - Journal of Virology A Structurally Conserved RNA Element within SARS-CoV-2 ORF1a RNA and S mRNA Regulates Translation in Response to Viral S Protein-Induced Signaling in Human Lung Cells \| Journal of Virology Journal of Virology Read here	nmrlearner	Online News	0	01-26-2022 10:54 PM
NYU Abu Dhabi researchers discover new nanobodies that can disable a key SARS-CoV-2 structural protein and disrupt viral replication - ZAWYA NYU Abu Dhabi researchers discover new nanobodies that can disable a key SARS-CoV-2 structural protein and disrupt viral replication - ZAWYA NYU Abu Dhabi researchers discover new nanobodies that can disable a key SARS-CoV-2 structural protein and disrupt viral replication ZAWYA Read here	nmrlearner	Online News	0	11-11-2021 09:56 AM
NMR structure and localization of a large fragment of the SARS-CoV fusion protein: Implications in viral cell fusion NMR structure and localization of a large fragment of the SARS-CoV fusion protein: Implications in viral cell fusion Publication date: February 2018 Source:Biochimica et Biophysica Acta (BBA) - Biomembranes, Volume 1860, Issue 2</br> Author(s): Mukesh Mahajan, Deepak Chatterjee, Kannaian Bhuvaneswari, Shubhadra Pillay, Surajit Bhattacharjya</br> The lethal Coronaviruses (CoVs), Severe Acute Respiratory Syndrome-associated Coronavirus (SARS-CoV) and most recently Middle East Respiratory Syndrome Coronavirus, (MERS-CoV) are serious human health hazard. A...	nmrlearner	Journal club	0	11-23-2017 08:38 AM
[NMR paper] NMR structure and localization of a large fragment of the SARS-CoV fusion protein: Implications in viral cell fusion. NMR structure and localization of a large fragment of the SARS-CoV fusion protein: Implications in viral cell fusion. NMR structure and localization of a large fragment of the SARS-CoV fusion protein: Implications in viral cell fusion. Biochim Biophys Acta. 2017 Oct 05;: Authors: Mahajan M, Chatterjee D, Bhuvaneswari K, Pillay S, Bhattacharjya S Abstract The lethal Coronaviruses (CoVs), Severe Acute Respiratory Syndrome-associated Coronavirus (SARS-CoV) and most recently Middle East Respiratory Syndrome Coronavirus, (MERS-CoV)...	nmrlearner	Journal club	0	10-11-2017 10:37 AM
Study shows how mutations disrupt ALS-linked protein \| EurekAlert ... - EurekAlert (press release) http://www.bionmr.com//t3.gstatic.com/images?q=tbn:ANd9GcSO0MkkUxtPQ4lK58RIiZ3I6PBDLS0IC8TOKFk2eGEQsEQ7UT3TJT4nSpwXD4xz1LnsOr5T6RU5 EurekAlert (press release) <img alt="" height="1" width="1"> Study shows how mutations disrupt ALS-linked protein \| EurekAlert ... EurekAlert (press release) Structural biologists provide a new explanation for how ALS-associated genetic flaws interfere with the proper function and behavior of the protein TDP-43. and more » Study shows how mutations disrupt ALS-linked protein \| EurekAlert ... - EurekAlert (press release)	nmrlearner	Online News	0	08-19-2016 04:05 AM
[NMR paper] Alternating zinc fingers in the human male associated protein ZFY: 2D NMR structure o Alternating zinc fingers in the human male associated protein ZFY: 2D NMR structure of an even finger and implications for "jumping-linker" DNA recognition. Related Articles Alternating zinc fingers in the human male associated protein ZFY: 2D NMR structure of an even finger and implications for "jumping-linker" DNA recognition. Biochemistry. 1991 Apr 9;30(14):3371-86 Authors: Kochoyan M, Havel TF, Nguyen DT, Dahl CE, Keutmann HT, Weiss MA ZFY, a sex-related Zn-finger protein encoded by the human Y chromosome, is distinguished from the general...	nmrlearner	Journal club	0	08-21-2010 11:16 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off