The road to fully programmable protein catalysis - Nature.com

		BioNMR > NMR community > Online News
The road to fully programmable protein catalysis - Nature.com

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

06-02-2022, 03:06 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,732

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

The road to fully programmable protein catalysis - Nature.com

The road to fully programmable protein catalysis - Nature.com

The road to fully programmable protein catalysis Nature.com Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Programmable peptoid template for disrupting protein–protein interactions inside cells - Chemistry World Programmable peptoid template for disrupting protein–protein interactions inside cells - Chemistry World Programmable peptoid template for disrupting protein–protein interactions inside cells Chemistry World Read here	nmrlearner	Online News	0	10-24-2021 09:51 AM
Conformable self-assembling amyloid protein coatings with genetically programmable functionality - Science Advances Conformable self-assembling amyloid protein coatings with genetically programmable functionality - Science Advances Conformable self-assembling amyloid protein coatings with genetically programmable functionality Science Advances Read here	nmrlearner	Online News	0	06-22-2020 10:19 PM
Programmable RNA Binding Proteins for Imaging andTherapeutics Programmable RNA Binding Proteins for Imaging andTherapeutics http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.7b01101/20171117/images/medium/bi-2017-01101x_0001.gif Biochemistry DOI: 10.1021/acs.biochem.7b01101 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/BmwUG1_YBPM More...	nmrlearner	Journal club	0	11-20-2017 02:16 PM
On the road again - Science Careers Blog (subscription) <img alt="" height="1" width="1" /> On the road again Science Careers Blog (subscription) Later, I returned to UZH to pursue a Ph.D. in the lab of Oliver Zerbe, applying nuclear magnetic resonance to the study of membrane proteins. I'm now finishing my Ph.D. With good research infrastructure and nature all around, Switzerland is a great ... and more » On the road again - Science Careers Blog (subscription) More...	nmrlearner	Online News	0	06-06-2014 03:59 PM
[NMR analysis blog] The bumpy road towards ASV The bumpy road towards ASV http://2.bp.blogspot.com/-OHurnvsVwgA/Ti7vXO_9kLI/AAAAAAAAAtQ/K06BTQA6_dQ/s400/IlDiavolo.jpgFigure: Photo taken during our bike climbing to Galibier (Lautaret) in the Tour de France 2011 One of the most exciting and complex challenges in NMR software for small molecules at present is the ability to verify a proposed chemical structure from its NMR spectrum automatically, a process commonly known as Automatic Structure Verification (ASV). Nowadays, it is possible to acquire spectra automatically on large numbers of compounds, but the interpretation of all...	nmrlearner	News from NMR blogs	0	07-26-2011 11:22 PM
Radio frequency assisted homonuclear recoupling - A Floquet description of homonuclear recoupling via surrounding heteronuclei in fully protonated to fully deuterated systems Radio frequency assisted homonuclear recoupling - A Floquet description of homonuclear recoupling via surrounding heteronuclei in fully protonated to fully deuterated systems Publication year: 2011 Source: Journal of Magnetic Resonance, In Press, Accepted Manuscript, Available online 18 January 2011</br> Michal, Leskes , Ümit, Akbey , Hartmut, Oschkinat , Barth-Jan, van Rossum , Shimon, Vega</br> We present a Floquet theory approach for the analysis of homonuclear recoupling assisted by radio frequency (RF) irradiation of surrounding heteronuclear spins. This description covers a...	nmrlearner	Journal club	0	01-19-2011 03:04 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off