RNA Puts Proteins in a Headlock - Scientist (blog)

		BioNMR > NMR community > Online News
RNA Puts Proteins in a Headlock - Scientist (blog)

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

05-20-2014, 11:10 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,734

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

RNA Puts Proteins in a Headlock - Scientist (blog)

RNA Puts Proteins in a Headlock - Scientist (blog)

Scientist (blog)

RNA Puts Proteins in a Headlock
Scientist (blog)
Compared to proteins, the structures of RNA and RNA-protein complexes have been more difficult to determine. The authors, based at ETH Zurich, used a protocol, detailed in a separate Nature Communications paper, combining nuclear magnetic resonance ...

Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMR images] in one plane can be in resonance at one time computer puts together ... http://www.triplexservices.com/Nuclear_Magnetic_Resonance_files/master03_image001.jpg 14/03/2014 6:41:08 AM GMT in one plane can be in resonance at one time computer puts together ... More...	nmrlearner	NMR pictures	0	03-14-2014 06:40 AM
Biomarked for Deathâ??Four Blood Proteins Can Predict Early Demise - Genetic Engineering News (blog) http://www.bionmr.com//t1.gstatic.com/images?q=tbn:ANd9GcRkoPt5Dyp7KewAE_J97PScBoa491M0a1ZPhGnp9UtY9NNoRJu_mLGBAP1okaqZCF5Ypm9dvF0 Genetic Engineering News (blog) <img alt="" height="1" width="1" /> Biomarked for Deathâ??Four Blood Proteins Can Predict Early Demise Genetic Engineering News (blog) The researchers detailed their results February 25 in PLOS Medicine, in an article entitled â??Biomarker Profiling by Nuclear Magnetic Resonance Spectroscopy for the Prediction of All-Cause Mortality: An Observational Study of 17,345 Persons.â?? To carry ... Biomarked for Deathâ??Four...	nmrlearner	Online News	0	02-28-2014 07:08 PM
Sr. Scientist / Principal Scientist ? Analytical Chemistry ? NMR \| Pfizer Research and Development Sr. Scientist / Principal Scientist ? Analytical Chemistry ? NMR \| Pfizer Research and Development US - Groton, CT, QualificationsTraining & Education:- Doctoral degree in chemistry (analytical or organic) or equivalent with 0-5years of experience in utilization of NMR in Industrial applications or masters degr More...	nmrlearner	Job marketplace	0	07-22-2011 10:39 PM
Smartphone app that helps doctors detect cancer - New Scientist (blog) http://nt3.ggpht.com/news/tbn/s6FW2fRgWxpKgM/6.jpg Mobile Magazine <img alt="" height="1" width="1" /> Smartphone app that helps doctors detect cancer New Scientist (blog) At the core is a micro nuclear magnetic resonance (microNMR) chip, a scaled-down version of the technology found in magnetic resonance imaging (MRI) scanners. It works by using magnetic nanoparticles to measure protein levels, looking for specific ... Micro-NMR Device Uses Smartphone to Diagnose Cancer Faster, More AccuratelyMobile Magazine New System Detects Tumor Cells QuicklyMD News (press release) Smartphone app...	nmrlearner	Online News	0	02-27-2011 01:23 AM
Scientist develops new, innovative methods for characterizing proteins - Eureka! Scie Scientist develops new, innovative methods for characterizing proteins - Eureka! Science News http://nt1.ggpht.com/news/tbn/sQ4HHoCA4rXUpM/6.jpg Eureka! Science News <img alt="" height="1" width="1" /> Scientist develops new, innovative methods for characterizing proteins Eureka! Science News Nuclear magnetic resonance (NMR) data are first collected for a particular protein that is being analyzed. (NMR is a research tool that utilizes high ... and more »	nmrlearner	NMR research groups	0	10-20-2010 06:50 AM
Scientist develops new methods for characterising proteins Scientist develops new methods for characterising proteins Using a combination of high-powered computers and advanced experimental magnetic resonance data, a Florida State University biophysical chemist has developed techniques that improve the way scientists can study and predict the structure and dynamics of proteins found in the human body. More...	nmrlearner	General	0	10-14-2010 05:01 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off