Researchers use magic-angle-spinning NMR to unveil structure of CAP-Gly protein - News-Medical.net

		BioNMR > NMR community > Online News
Researchers use magic-angle-spinning NMR to unveil structure of CAP-Gly protein - News-Medical.net

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

11-26-2015, 12:22 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,732

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Researchers use magic-angle-spinning NMR to unveil structure of CAP-Gly protein - News-Medical.net

News-Medical.net

Researchers use magic-angle-spinning NMR to unveil structure of CAP-Gly protein
News-Medical.net
The research team used magic-angle-spinning nuclear magnetic resonance spectrometry (NMR) in the Department of Chemistry and Biochemistry at UD to unveil the structure of the CAP-Gly protein assembled on polymerized microtubules. The CAP-Gly ...
Research team finds that protein motions regulate HIV infectivityMedical Xpress

all 10 news articles »

Researchers use magic-angle-spinning NMR to unveil structure of CAP-Gly protein - News-Medical.net
More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Structure of a Three Helix Membrane Protein from Oriented Sample and Magic Angle Spinning NMR Data Structure of a Three Helix Membrane Protein from Oriented Sample and Magic Angle Spinning NMR Data Publication date: 28 January 2014 Source:Biophysical Journal, Volume 106, Issue 2, Supplement 1</br> Author(s): Dylan T. Murray , Ivan Hung , Timothy A. Cross</br> </br></br> </br></br> More...	nmrlearner	Journal club	0	01-29-2014 12:50 AM
[NMR paper] Selectively dispersed isotope labeling for protein structure determination by magic angle spinning NMR. Selectively dispersed isotope labeling for protein structure determination by magic angle spinning NMR. Selectively dispersed isotope labeling for protein structure determination by magic angle spinning NMR. J Biomol NMR. 2013 Aug 30; Authors: Eddy MT, Belenky M, Sivertsen AC, Griffin RG, Herzfeld J Abstract The power of nuclear magnetic resonance spectroscopy derives from its site-specific access to chemical, structural and dynamic information. However, the corresponding multiplicity of interactions can be difficult to tease apart....	nmrlearner	Journal club	0	08-31-2013 06:56 PM
[NMR paper] Protein Structure Determination by Magic-Angle Spinning Solid-State NMR, and Insights into the Formation, Structure, and Stability of Amyloid Fibrils. Protein Structure Determination by Magic-Angle Spinning Solid-State NMR, and Insights into the Formation, Structure, and Stability of Amyloid Fibrils. Related Articles Protein Structure Determination by Magic-Angle Spinning Solid-State NMR, and Insights into the Formation, Structure, and Stability of Amyloid Fibrils. Annu Rev Biophys. 2013 Mar 22; Authors: Comellas G, Rienstra CM Abstract Protein structure determination methods using magic-angle spinning solidstate nuclear magnetic resonance (MAS SSNMR) have experienced a remarkable...	nmrlearner	Journal club	0	03-27-2013 03:33 PM
Researchers solve complete 3-D structure of E6 proteins in HPV 16 - News-Medical.net Researchers solve complete 3-D structure of E6 proteins in HPV 16 - News-Medical.net <img alt="" height="1" width="1" /> Researchers solve complete 3-D structure of E6 proteins in HPV 16 News-Medical.net Success depended on two factors: the development of methods for isolating protein E6 as well as the use of nuclear magnetic resonance (NMR) and crystallography techniques. Having dealt with various aggregation and purification problems, the researchers ... and more » Read here	nmrlearner	Online News	0	02-16-2013 05:53 AM
[NMR paper] Probing Structure and Dynamics of Protein Assemblies by Magic Angle Spinning NMR Spectroscopy. Probing Structure and Dynamics of Protein Assemblies by Magic Angle Spinning NMR Spectroscopy. Probing Structure and Dynamics of Protein Assemblies by Magic Angle Spinning NMR Spectroscopy. Acc Chem Res. 2013 Feb 13; Authors: Yan S, Suiter CL, Hou G, Zhang H, Polenova T Abstract In living organisms, biological molecules often organize into multicomponent complexes. Such assemblies consist of various proteins and carry out essential functions, ranging from cell division, transport, and energy transduction to catalysis, signaling, and viral...	nmrlearner	Journal club	0	02-14-2013 02:37 PM
[NMR paper] Probing membrane protein orientation and structure using fast magic-angle-spinning so Probing membrane protein orientation and structure using fast magic-angle-spinning solid-state NMR. Related Articles Probing membrane protein orientation and structure using fast magic-angle-spinning solid-state NMR. J Biomol NMR. 2004 Nov;30(3):253-65 Authors: Andronesi OC, Pfeifer JR, Al-Momani L, Ozdirekcan S, Rijkers DT, Angerstein B, Luca S, Koert U, Killian JA, Baldus M One and two-dimensional solid-state NMR experiments are discussed that permit probing local structure and overall molecular conformation of membrane-embedded polypeptides...	nmrlearner	Journal club	0	11-24-2010 10:03 PM
[NMR paper] Structure of a protein determined by solid-state magic-angle-spinning NMR spectroscop Structure of a protein determined by solid-state magic-angle-spinning NMR spectroscopy. Related Articles Structure of a protein determined by solid-state magic-angle-spinning NMR spectroscopy. Nature. 2002 Nov 7;420(6911):98-102 Authors: Castellani F, van Rossum B, Diehl A, Schubert M, Rehbein K, Oschkinat H The determination of a representative set of protein structures is a chief aim in structural genomics. Solid-state NMR may have a crucial role in structural investigations of those proteins that do not easily form crystals or are not...	nmrlearner	Journal club	0	11-24-2010 08:58 PM
Researchers elucidate Qua1 spatial structure region of Sam68 protein - News-Medical.n Researchers elucidate Qua1 spatial structure region of Sam68 protein - News-Medical.net <img alt="" height="1" width="1" /> Researchers elucidate Qua1 spatial structure region of Sam68 protein News-Medical.net Using NMR spectroscopy, Professor Michael Sattler and his team elucidated the spatial structure of the Qua1 region of Sam68, which is responsible for the ... and more » Read here	nmrlearner	Online News	0	09-13-2010 03:33 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off