Research reveals how disordered proteins contribute to the ... - ANSTO

		BioNMR > NMR community > Online News
Research reveals how disordered proteins contribute to the ... - ANSTO

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

09-29-2023, 08:50 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Research reveals how disordered proteins contribute to the ... - ANSTO

Research reveals how disordered proteins contribute to the ... - ANSTO

Research reveals how disordered proteins contribute to the ... ANSTO Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Research brings better understanding of how disordered proteins ... - ANSTO Research brings better understanding of how disordered proteins ... - ANSTO Research brings better understanding of how disordered proteins ... ANSTO Read here	nmrlearner	Online News	0	09-29-2023 08:50 PM
Biologists publish new guidelines to facilitate data sharing of research on disordered proteins - Phys.org Biologists publish new guidelines to facilitate data sharing of research on disordered proteins - Phys.org Biologists publish new guidelines to facilitate data sharing of research on disordered proteins Phys.org Read here	nmrlearner	Online News	0	07-18-2023 06:03 AM
Bringing research on disordered proteins to order - Mirage News Bringing research on disordered proteins to order - Mirage News Bringing research on disordered proteins to order Mirage News Read here	nmrlearner	Online News	0	07-07-2023 03:20 AM
Bringing research on disordered proteins to order - Mirage News Bringing research on disordered proteins to order - Mirage News Bringing research on disordered proteins to order Mirage News Read here	nmrlearner	Online News	0	07-03-2023 08:55 PM
[NMR paper] Linear discriminant analysis reveals hidden patterns in NMR chemical shifts of intrinsically disordered proteins Linear discriminant analysis reveals hidden patterns in NMR chemical shifts of intrinsically disordered proteins NMR spectroscopy is key in the study of intrinsically disordered proteins (IDPs). Yet, even the first step in such an analysis-the assignment of observed resonances to particular nuclei-is often problematic due to low peak dispersion in the spectra of IDPs. We show that the assignment process can be aided by finding "hidden" chemical shift patterns specific to the amino acid residue types. We find such patterns in the training data from the Biological Magnetic Resonance Bank...	nmrlearner	Journal club	0	10-07-2022 08:36 AM
Kanazawa University research: High-speed atomic force microscopy takes on intrinsically disordered proteins - PRNewswire Kanazawa University research: High-speed atomic force microscopy takes on intrinsically disordered proteins PRNewswire Kanazawa University research: High-speed atomic force microscopy takes on intrinsically disordered proteins - PRNewswire More...	nmrlearner	Online News	0	12-11-2020 03:28 PM
Kanazawa University research: High-speed atomic force microscopy takes on intrinsically disordered proteins - StreetInsider.com Kanazawa University research: High-speed atomic force microscopy takes on intrinsically disordered proteins - StreetInsider.com Kanazawa University research: High-speed atomic force microscopy takes on intrinsically disordered proteins StreetInsider.com Read here	nmrlearner	Online News	0	12-11-2020 03:28 PM
Kanazawa University research: High-speed atomic force microscopy takes on intrinsically disordered proteins - PR Newswire UK Kanazawa University research: High-speed atomic force microscopy takes on intrinsically disordered proteins - PR Newswire UK Kanazawa University research: High-speed atomic force microscopy takes on intrinsically disordered proteins PR Newswire UK Read here	nmrlearner	Online News	0	12-08-2020 01:36 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off