For proteins, a small step from good to bad - Cosmos

		BioNMR > NMR community > Online News
For proteins, a small step from good to bad - Cosmos

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

04-23-2012, 03:31 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,780

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

For proteins, a small step from good to bad - Cosmos

For proteins, a small step from good to bad - Cosmos

Cosmos

For proteins, a small step from good to bad
Cosmos
Using a new visualisation technique called relaxation dispersion nuclear resonance spectroscopy (RD NMR), he and colleagues captured an image of a rare intermediate state of a structure found in hundreds of different proteins, called the SH3 domain.

Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMR900 blog] NMR is Good contest by Cambridge Isotope Laboratories NMR is Good contest by Cambridge Isotope Laboratories Have you acquired an NMR spectrum you are really proud of? Submit - Your favorite NMR spectrum will be showcased on CIL's website and in our Hospitality Suite at ENC 2012. Vote - Vote for your favorite NMR spectra online, April 16th-18th and in person at CIL's ENC Hospitality Suite. All votes will be entered to win an iPAD2! Win - Receive the most votes and win a travel stipend for $1500 or CIL product in the amount of $1500.	nmrlearner	News from NMR blogs	0	01-27-2012 04:27 AM
FROM GOOD TO GREAT - Deakin University - Australia FROM GOOD TO GREAT - Deakin University - Australia As seen in the 16 December issue of Science: DEAKIN UNIVERSITY AUSTRALIA MELBOURNE GEELONG WARRNAMBOOL FROM GOOD TO GREAT	nmrlearner	Job marketplace	0	12-15-2011 08:48 PM
[NMR paper] CD and NMR investigations on trifluoroethanol-induced step-wise folding of helical se CD and NMR investigations on trifluoroethanol-induced step-wise folding of helical segment from scorpion neurotoxin. Related Articles CD and NMR investigations on trifluoroethanol-induced step-wise folding of helical segment from scorpion neurotoxin. Eur J Biochem. 1999 Sep;264(2):468-78 Authors: Khandelwal P, Seth S, Hosur RV A 14 amino acid residue peptide from the helical region of Scorpion neurotoxin has been structurally characterized using CD and NMR spectroscopy in different solvent conditions. 2,2,2-Trifluoroethanol (TFE) titration has...	nmrlearner	Journal club	0	11-18-2010 08:31 PM
NMR Reveals Two-Step Association of Congo Red to Amyloid ? in Low-Molecular-Weight Ag NMR Reveals Two-Step Association of Congo Red to Amyloid ? in Low-Molecular-Weight Aggregates. Related Articles NMR Reveals Two-Step Association of Congo Red to Amyloid ? in Low-Molecular-Weight Aggregates. J Phys Chem B. 2010 Nov 15; Authors: Pedersen MO, Mikkelsen K, Behrens MA, Pedersen JS, Enghild JJ, Skrydstrup T, Malmendal A, Nielsen NC Aggregation of the Amyloid ? peptide into amyloid fibrils is closely related to development of Alzheimer's disease. Many small aromatic compounds have been found to act as inhibitors of fibril formation, and...	nmrlearner	Journal club	0	11-17-2010 05:49 PM
[NMRwiki tweet] nmrwiki: pls suggest a good 15N hsqc for 250 mM Guanidinium HCl #nmr http://qa.nmrwik nmrwiki: pls suggest a good 15N hsqc for 250 mM Guanidinium HCl #nmr http://qa.nmrwiki.org/question/186/ nmrwiki: pls suggest a good 15N hsqc for 250 mM Guanidinium HCl #nmr http://qa.nmrwiki.org/question/186/ Source: NMRWiki tweets	nmrlearner	Twitter NMR	0	10-23-2010 07:42 AM
[Ryan's blog] From FID to Structure in 30 Minutes? Investigating the CASE Limiting Step Source: Ryan's blog From FID to Structure in 30 Minutes? Investigating the CASE Limiting Step In yesterday's post I pointed you to an article that has become the most accessed article of all time in the Journal of Cheminformatics, co-authored by representatives of ACD/Labs. This article is a very comprehensive outline of the different approaches,...	nmrlearner	News from NMR blogs	0	08-21-2010 08:57 PM
What are good solvents for NMR spectroscopy and why? what are the apporiate solvents for NMR spectroscopy and why?	Jason M	NMR Questions and Answers	1	11-18-2002 02:32 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off