[NMR paper] Folding Trp-cage to NMR resolution native structure using a coarse-grained protein mo
Folding Trp-cage to NMR resolution native structure using a coarse-grained protein model.
Related Articles Folding Trp-cage to NMR resolution native structure using a coarse-grained protein model.
Biophys J. 2005 Jan;88(1):147-55
Authors: Ding F, Buldyrev SV, Dokholyan NV
We develop a coarse-grained protein model with a simplified amino acid interaction potential. Using this model, we perform discrete molecular dynamics folding simulations of a small 20-residue protein--Trp-cage--from a fully extended conformation. We demonstrate the ability...
nmrlearner
Journal club
0
11-24-2010 10:03 PM
[NMR paper] Prevention of aggregation after refolding by balanced stabilization-destabilization:
Prevention of aggregation after refolding by balanced stabilization-destabilization: production of the Arabidopsis thaliana protein APG8a (At4g21980) for NMR structure determination.
Related Articles Prevention of aggregation after refolding by balanced stabilization-destabilization: production of the Arabidopsis thaliana protein APG8a (At4g21980) for NMR structure determination.
Protein Expr Purif. 2004 Apr;34(2):280-3
Authors: Chae YK, Im H, Zhao Q, Doelling JH, Vierstra RD, Markley JL
The gene coding for APG8a (At4g21980), a protein from...
nmrlearner
Journal club
0
11-24-2010 09:51 PM
[NMR paper] Ab initio folding simulation of the Trp-cage mini-protein approaches NMR resolution.
Ab initio folding simulation of the Trp-cage mini-protein approaches NMR resolution.
Related Articles Ab initio folding simulation of the Trp-cage mini-protein approaches NMR resolution.
J Mol Biol. 2003 Mar 28;327(3):711-7
Authors: Chowdhury S, Lee MC, Xiong G, Duan Y
Here, we report a 100 ns molecular dynamics simulation of the folding process of a recently designed autonomous-folding mini-protein designated as tc5b with a new AMBER force field parameter set developed based on condensed-phase quantum mechanical calculations and a Generalized...
Protein stabilization and refolding in a gigantic self-assembled cage - ScienceDirect.com
Linear Mode
