A protein-RNA structure hints at how viruses commandeer human proteins - Phys.Org

		BioNMR > NMR community > Online News
A protein-RNA structure hints at how viruses commandeer human proteins - Phys.Org

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

11-12-2015, 11:28 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

A protein-RNA structure hints at how viruses commandeer human proteins - Phys.Org

Phys.Org

A protein-RNA structure hints at how viruses commandeer human proteins
Phys.Org
To discover the structure bound to RNA, the researchers combined three techniques: X-ray crystallography, nuclear magnetic resonance spectroscopy and small angle x-ray scattering. Each technique yielded a piece of the puzzle. To bind to RNA, hnRNP A1 ...

and more »

A protein-RNA structure hints at how viruses commandeer human proteins - Phys.Org
More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
A protein-RNA structure hints at how viruses commandeer human proteins Case ... - EurekAlert (press release) http://www.bionmr.com//t0.gstatic.com/images?q=tbn:ANd9GcTchvMrYbVW3nlJ5XMw8wY9tF-qtJ7_TnZv0RAi6jqfCYs7Pe_qiI3R9xbX2xvJb0xpoPa9O24 EurekAlert (press release) <img alt="" height="1" width="1"> A protein-RNA structure hints at how viruses commandeer human proteins Case ... EurekAlert (press release) To discover the structure bound to RNA, the researchers combined three techniques: X-ray crystallography, nuclear magnetic resonance spectroscopy and small angle x-ray scattering. Each technique yielded a piece of the puzzle. To bind to RNA, hnRNP A1 ... and more » A protein-RNA...	nmrlearner	Online News	0	11-12-2015 09:05 AM
'Invisible' protein structure explains the power of enzymes - Phys.Org 'Invisible' protein structure explains the power of enzymes - Phys.Org http://www.bionmr.com//t3.gstatic.com/images?q=tbn:ANd9GcRJeF5G2jmoqIG-4dY1tKobWbSiwmf4FmwBqublhTOiHh6zkZAYoKD-5N0dKxqGaUYjP_yL-4s Phys.Org <img alt="" height="1" width="1"> 'Invisible' protein structure explains the power of enzymes Phys.Org The discovery has been made possible thanks to a broad scientific approach where numerous advanced biophysical techniques have been used; Nuclear Magnetic Resonance (NMR) and x-ray crystallography being the main techniques. "One of the ... and more »	nmrlearner	Online News	0	07-03-2015 07:40 PM
Structure of bacterial nanowire protein hints at secrets of conduction - HealthCanal.com Structure of bacterial nanowire protein hints at secrets of conduction - HealthCanal.com <img alt="" height="1" width="1" /> Structure of bacterial nanowire protein hints at secrets of conduction HealthCanal.com But the protein by itself isn't enough to reveal how conduction works. Many pilin proteins work together to form a fiber, and Reardon and Mueller only had one. Nor did the researchers have the whole fiber to put into the NMR instrument. To get more ... Read here	nmrlearner	Online News	0	11-25-2013 11:32 AM
Structure of bacterial nanowire protein hints at secrets of conduction - Space Daily Structure of bacterial nanowire protein hints at secrets of conduction - Space Daily <img alt="" height="1" width="1" /> Structure of bacterial nanowire protein hints at secrets of conduction Space Daily But the protein by itself isn't enough to reveal how conduction works. Many pilin proteins work together to form a fiber, and Reardon and Mueller only had one. Nor did the researchers have the whole fiber to put into the NMR instrument. To get more ... Read here	nmrlearner	Online News	0	11-19-2013 11:35 AM
Structure of bacterial nanowire protein hints at secrets of conduction - Eureka! Science News Structure of bacterial nanowire protein hints at secrets of conduction - Eureka! Science News <img alt="" height="1" width="1" /> Structure of bacterial nanowire protein hints at secrets of conduction Eureka! Science News But the protein by itself isn't enough to reveal how conduction works. Many pilin proteins work together to form a fiber, and Reardon and Mueller only had one. Nor did the researchers have the whole fiber to put into the NMR instrument. To get more ... Read here	nmrlearner	Online News	0	11-16-2013 03:09 AM
Structure of Bacterial Nanowire Protein Hints at Secrets of Conduction - Science Daily (press release) Structure of Bacterial Nanowire Protein Hints at Secrets of Conduction - Science Daily (press release) <img alt="" height="1" width="1" /> Structure of Bacterial Nanowire Protein Hints at Secrets of Conduction Science Daily (press release) But the protein by itself isn't enough to reveal how conduction works. Many pilin proteins work together to form a fiber, and Reardon and Mueller only had one. Nor did the researchers have the whole fiber to put into the NMR instrument. To get more ... Read here	nmrlearner	Online News	0	11-15-2013 12:34 AM
Structure of bacterial nanowire protein hints at secrets of conduction (w/video) - Nanowerk Structure of bacterial nanowire protein hints at secrets of conduction (w/video) - Nanowerk http://www.bionmr.com//t2.gstatic.com/images?q=tbn:ANd9GcR4C0iCSYTVyGbU_4-ak9btAeiQLG7dARBEd6W7bNY-DGoLBQQeAvqOIegrroCWIZ10BBzvGeo Nanotechnology News <img alt="" height="1" width="1" /> Structure of bacterial nanowire protein hints at secrets of conduction (w/video) Nanowerk To better understand how pilins contribute to conduction, Reardon and NMR lead scientist Karl Mueller explored pilin from an electrically conducting bacteria known as Geobacter sulfurreducens. Previous research on...	nmrlearner	Online News	0	11-13-2013 06:30 AM
Crystal structure of a cyanobacterial protein associated with nitrogen fixation - Phys.Org Crystal structure of a cyanobacterial protein associated with nitrogen fixation - Phys.Org <img alt="" height="1" width="1" /> Crystal structure of a cyanobacterial protein associated with nitrogen fixation Phys.Org NMR and other biophysical data collected at EMSL confirmed that the biological unit of DUF269 in solution was the same as observed in the asymmetric unit of the crystal, a dimer. Further biochemical experiments are in progress to determine the ... Read here	nmrlearner	Online News	0	07-24-2012 08:28 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off