The protein conformational basis of isoflavone biosynthesis | Communications Biology - Nature.com

		BioNMR > NMR community > Online News
The protein conformational basis of isoflavone biosynthesis \| Communications Biology - Nature.com

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

11-19-2022, 10:33 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

The protein conformational basis of isoflavone biosynthesis | Communications Biology - Nature.com

The protein conformational basis of isoflavone biosynthesis | Communications Biology - Nature.com

The protein conformational basis of isoflavone biosynthesis | Communications Biology Nature.com Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Paternal low protein diet perturbs inter-generational metabolic homeostasis in a tissue-specific manner in mice \| Communications Biology - Nature.com Paternal low protein diet perturbs inter-generational metabolic homeostasis in a tissue-specific manner in mice \| Communications Biology - Nature.com Paternal low protein diet perturbs inter-generational metabolic homeostasis in a tissue-specific manner in mice \| Communications Biology Nature.com Read here	nmrlearner	Online News	0	09-26-2022 05:24 PM
An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins \| Communications Biology - Nature.com An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins \| Communications Biology - Nature.com An automated liquid jet for fluorescence dosimetry and microsecond radiolytic labeling of proteins \| Communications Biology Nature.com Read here	nmrlearner	Online News	0	08-26-2022 04:47 AM
A thermodynamic investigation of amyloid precursor protein processing by human ?-secretase \| Communications Biology - Nature.com A thermodynamic investigation of amyloid precursor protein processing by human ?-secretase \| Communications Biology - Nature.com A thermodynamic investigation of amyloid precursor protein processing by human ?-secretase \| Communications Biology Nature.com Read here	nmrlearner	Online News	0	08-19-2022 10:43 PM
A co-crystal berberine-ibuprofen improves obesity by inhibiting the protein kinases TBK1 and IKK? \| Communications Biology - Nature.com A co-crystal berberine-ibuprofen improves obesity by inhibiting the protein kinases TBK1 and IKK? \| Communications Biology - Nature.com A co-crystal berberine-ibuprofen improves obesity by inhibiting the protein kinases TBK1 and IKK? \| Communications Biology Nature.com Read here	nmrlearner	Online News	0	08-14-2022 09:48 AM
Structure-based rational design of an enhanced fluorogen-activating protein for fluorogens based on GFP chromophore \| Communications Biology - Nature.com Structure-based rational design of an enhanced fluorogen-activating protein for fluorogens based on GFP chromophore \| Communications Biology - Nature.com Structure-based rational design of an enhanced fluorogen-activating protein for fluorogens based on GFP chromophore \| Communications Biology Nature.com Read here	nmrlearner	Online News	0	07-17-2022 10:07 PM
Artificial intelligence guided conformational mining of intrinsically disordered proteins \| Communications Biology - Nature.com Artificial intelligence guided conformational mining of intrinsically disordered proteins \| Communications Biology - Nature.com Artificial intelligence guided conformational mining of intrinsically disordered proteins \| Communications Biology Nature.com Read here	nmrlearner	Online News	0	06-23-2022 06:33 AM
Dynamic interplay between the periplasmic chaperone SurA and the BAM complex in outer membrane protein folding \| Communications Biology - Nature.com Dynamic interplay between the periplasmic chaperone SurA and the BAM complex in outer membrane protein folding \| Communications Biology - Nature.com Dynamic interplay between the periplasmic chaperone SurA and the BAM complex in outer membrane protein folding \| Communications Biology Nature.com Read here	nmrlearner	Online News	0	06-23-2022 06:33 AM
Phase separation driven by interchangeable properties in the intrinsically disordered regions of protein paralogs \| Communications Biology - Nature.com Phase separation driven by interchangeable properties in the intrinsically disordered regions of protein paralogs \| Communications Biology - Nature.com Phase separation driven by interchangeable properties in the intrinsically disordered regions of protein paralogs \| Communications Biology Nature.com Read here	nmrlearner	Online News	0	04-30-2022 05:19 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off