Protein–ice interaction of an antifreeze protein observed with solid-state NMR | Proceedings of the National Academy ... - pnas.org

		BioNMR > NMR community > Online News
Protein–ice interaction of an antifreeze protein observed with solid-state NMR \| Proceedings of the National Academy ... - pnas.org

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

03-06-2024, 05:10 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,732

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Protein–ice interaction of an antifreeze protein observed with solid-state NMR | Proceedings of the National Academy ... - pnas.org

Protein–ice interaction of an antifreeze protein observed with solid-state NMR | Proceedings of the National Academy ... - pnas.org

Protein–ice interaction of an antifreeze protein observed with solid-state NMR | Proceedings of the National Academy ... pnas.org Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Prion protein NMR structures of elk and of mouse/elk hybrids \| Proceedings of the National Academy of Sciences - pnas.org Prion protein NMR structures of elk and of mouse/elk hybrids \| Proceedings of the National Academy of Sciences - pnas.org Prion protein NMR structures of elk and of mouse/elk hybrids \| Proceedings of the National Academy of Sciences pnas.org Read here	nmrlearner	Online News	0	12-28-2023 10:50 PM
A de novo protein catalyzes the synthesis of semiconductor quantum dots \| Proceedings of the National Academy of Sciences - pnas.org A de novo protein catalyzes the synthesis of semiconductor quantum dots \| Proceedings of the National Academy of Sciences - pnas.org A de novo protein catalyzes the synthesis of semiconductor quantum dots \| Proceedings of the National Academy of Sciences pnas.org Read here	nmrlearner	Online News	0	12-14-2022 05:41 AM
Evolution avoids a pathological stabilizing interaction in the immune protein S100A9 \| Proceedings of the National Academy of Sciences - pnas.org Evolution avoids a pathological stabilizing interaction in the immune protein S100A9 \| Proceedings of the National Academy of Sciences - pnas.org Evolution avoids a pathological stabilizing interaction in the immune protein S100A9 \| Proceedings of the National Academy of Sciences pnas.org Read here	nmrlearner	Online News	0	10-06-2022 06:14 PM
Mechanism by which T7 bacteriophage protein Gp1.2 inhibits Escherichia coli dGTPase \| Proceedings of the National Academy of Sciences - pnas.org Mechanism by which T7 bacteriophage protein Gp1.2 inhibits Escherichia coli dGTPase \| Proceedings of the National Academy of Sciences - pnas.org Mechanism by which T7 bacteriophage protein Gp1.2 inhibits Escherichia coli dGTPase \| Proceedings of the National Academy of Sciences pnas.org Read here	nmrlearner	Online News	0	09-15-2022 06:02 AM
Mechanism by which T7 bacteriophage protein Gp1.2 inhibits Escherichia coli dGTPase \| Proceedings of the National Academy of Sciences - pnas.org Mechanism by which T7 bacteriophage protein Gp1.2 inhibits Escherichia coli dGTPase \| Proceedings of the National Academy of Sciences - pnas.org Mechanism by which T7 bacteriophage protein Gp1.2 inhibits Escherichia coli dGTPase \| Proceedings of the National Academy of Sciences pnas.org Read here	nmrlearner	Online News	0	09-07-2022 04:33 AM
A fine balance of hydrophobic-electrostatic communication pathways in a pH-switching protein \| Proceedings of the National Academy of Sciences - pnas.org A fine balance of hydrophobic-electrostatic communication pathways in a pH-switching protein \| Proceedings of the National Academy of Sciences - pnas.org A fine balance of hydrophobic-electrostatic communication pathways in a pH-switching protein \| Proceedings of the National Academy of Sciences pnas.org Read here	nmrlearner	Online News	0	08-26-2022 04:47 AM
De novo designed protein inhibitors of amyloid aggregation and seeding \| Proceedings of the National Academy of Sciences - pnas.org De novo designed protein inhibitors of amyloid aggregation and seeding \| Proceedings of the National Academy of Sciences - pnas.org De novo designed protein inhibitors of amyloid aggregation and seeding \| Proceedings of the National Academy of Sciences pnas.org Read here	nmrlearner	Online News	0	08-24-2022 02:40 PM
A fine balance of hydrophobic-electrostatic communication pathways in a pH-switching protein \| Proceedings of the National Academy of Sciences - pnas.org A fine balance of hydrophobic-electrostatic communication pathways in a pH-switching protein \| Proceedings of the National Academy of Sciences - pnas.org A fine balance of hydrophobic-electrostatic communication pathways in a pH-switching protein \| Proceedings of the National Academy of Sciences pnas.org Read here	nmrlearner	Online News	0	06-29-2022 05:34 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off