BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > Online News
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 03-31-2024, 11:10 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,733
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default The NMR structure of the Orf63 lytic developmental protein from lambda bacteriophage | Scientific Reports - Nature.com

The NMR structure of the Orf63 lytic developmental protein from lambda bacteriophage | Scientific Reports - Nature.com

The NMR structure of the Orf63 lytic developmental protein from lambda bacteriophage | Scientific Reports Nature.com Read here
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[NMR paper] The NMR structure of the Orf63 lytic developmental protein from lambda bacteriophage
The NMR structure of the Orf63 lytic developmental protein from lambda bacteriophage The orf63 gene resides in a region of the lambda bacteriophage genome between the exo and xis genes and is among the earliest genes transcribed during infection. In lambda phage and Shiga toxin (Stx) producing phages found in enterohemorrhagic Escherichia coli (EHEC) associated with food poisoning, Orf63 expression reduces the host survival and hastens the period between infection and lysis thereby giving it pro-lytic qualities. The NMR structure of dimeric Orf63 reveals a fold consisting of two... ...
nmrlearner Journal club 0 02-16-2024 07:14 AM
The near-symmetry of protein oligomers: NMR-derived structures | Scientific Reports - Nature.com
The near-symmetry of protein oligomers: NMR-derived structures | Scientific Reports - Nature.com The near-symmetry of protein oligomers: NMR-derived structures | Scientific Reports Nature.com Read here
nmrlearner Online News 0 12-28-2023 10:50 PM
Assignment and secondary structure of the YadA membrane protein by solid-state MAS NMR | Scientific Reports - Nature.com
Assignment and secondary structure of the YadA membrane protein by solid-state MAS NMR | Scientific Reports - Nature.com Assignment and secondary structure of the YadA membrane protein by solid-state MAS NMR | Scientific Reports Nature.com Read here
nmrlearner Online News 0 12-28-2023 10:50 PM
AlphaFold2 models indicate that protein sequence determines both structure and dynamics | Scientific Reports - Nature.com
AlphaFold2 models indicate that protein sequence determines both structure and dynamics | Scientific Reports - Nature.com AlphaFold2 models indicate that protein sequence determines both structure and dynamics | Scientific Reports Nature.com Read here
nmrlearner Online News 0 08-11-2022 01:49 PM
Machine learning/molecular dynamic protein structure prediction approach to investigate the protein conformational ensemble | Scientific Reports - Nature.com
Machine learning/molecular dynamic protein structure prediction approach to investigate the protein conformational ensemble | Scientific Reports - Nature.com Machine learning/molecular dynamic protein structure prediction approach to investigate the protein conformational ensemble | Scientific Reports Nature.com Read here
nmrlearner Online News 0 08-11-2022 01:49 PM
Crystal structure of potato 14-3-3 protein St14f revealed the importance of helix I in StFDL1 recognition | Scientific Reports - Nature.com
Crystal structure of potato 14-3-3 protein St14f revealed the importance of helix I in StFDL1 recognition | Scientific Reports - Nature.com Crystal structure of potato 14-3-3 protein St14f revealed the importance of helix I in StFDL1 recognition | Scientific Reports Nature.com Read here
nmrlearner Online News 0 07-09-2022 07:39 AM
[NMR paper] NMR solution structure of the monomeric form of the bacteriophage lambda capsid stabi
NMR solution structure of the monomeric form of the bacteriophage lambda capsid stabilizing protein gpD. Related Articles NMR solution structure of the monomeric form of the bacteriophage lambda capsid stabilizing protein gpD. J Biomol NMR. 2005 Apr;31(4):351-6 Authors: Iwai H, Forrer P, Plückthun A, Güntert P
nmrlearner Journal club 0 11-25-2010 08:21 PM
[NMR paper] NMR structure of the bacteriophage lambda N peptide/boxB RNA complex: recognition of
NMR structure of the bacteriophage lambda N peptide/boxB RNA complex: recognition of a GNRA fold by an arginine-rich motif. Related Articles NMR structure of the bacteriophage lambda N peptide/boxB RNA complex: recognition of a GNRA fold by an arginine-rich motif. Cell. 1998 Apr 17;93(2):289-99 Authors: Legault P, Li J, Mogridge J, Kay LE, Greenblatt J The structure of the complex formed by the arginine-rich motif of the transcriptional antitermination protein N of phage lambda and boxB RNA was determined by heteronuclear magnetic resonance...
nmrlearner Journal club 0 11-17-2010 11:06 PM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 03:56 PM.


Map