NMR structure of a key anticoagulant protein may help prevent thrombosis - Medical Xpress

		BioNMR > NMR community > Online News
NMR structure of a key anticoagulant protein may help prevent thrombosis - Medical Xpress

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

04-28-2020, 05:11 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,732

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

NMR structure of a key anticoagulant protein may help prevent thrombosis - Medical Xpress

NMR structure of a key anticoagulant protein may help prevent thrombosis - Medical Xpress

NMR structure of a key anticoagulant protein may help prevent thrombosis Medical Xpress Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
NMR structure of a key anticoagulant protein may help prevent thrombosis - EurekAlert NMR structure of a key anticoagulant protein may help prevent thrombosis - EurekAlert NMR structure of a key anticoagulant protein may help prevent thrombosis EurekAlert Read here	nmrlearner	Online News	0	02-29-2020 09:52 PM
'Lone wolf' protein offers new pathway to cancer treatments - Medical Xpress http://www.bionmr.com//t3.gstatic.com/images?q=tbn:ANd9GcRNPGGDZnHZBsPLewQGfUXA8SmuQ50fs5rw0RBI3xmSeRORDsbBTnjEM4oc3kLu77P2RXGP1wcq Medical Xpress <img alt="" height="1" width="1"> 'Lone wolf' protein offers new pathway to cancer treatments Medical Xpress The researchers used a structural analytical technique called nuclear magnetic resonance spectroscopy to probe BOK's structure. They pinpointed a special groove in the intricately folded protein that, on its own, can alter its shape to target and ... 'Lone wolf' protein offers new pathway to cancer treatments - Medical Xpress	nmrlearner	Online News	0	05-17-2018 04:09 PM
Research reveals atomic-level changes in ALS-linked protein - Medical Xpress Research reveals atomic-level changes in ALS-linked protein - Medical Xpress http://www.bionmr.com//t0.gstatic.com/images?q=tbn:ANd9GcSvc64Zx-ttScvZ8HPYLGFKnZuOLgtlvajMmLe4wWDz3RWra_XyD03l5vN3F0IycEawraPnws6m Medical Xpress <img alt="" height="1" width="1"> Research reveals atomic-level changes in ALS-linked protein Medical Xpress The protein collects in membrane-less organelles, where it may use its low-complexity domain to stick together, much in the way that water collects into droplets on the outside of a cold soda bottle on a humid summer day. Until the publication of this ... ...	nmrlearner	Online News	0	01-29-2018 01:57 PM
Alzheimer's Tau protein forms toxic complexes with cell membranes - Medical Xpress Alzheimer's Tau protein forms toxic complexes with cell membranes - Medical Xpress http://www.bionmr.com//t2.gstatic.com/images?q=tbn:ANd9GcR6fTPk3bLO1lcSBmyfm0L1ZBHdmb3xbrT8kkWOZXO6tNpmHSv8laNkcaVHA4gjG3vy55UZ-5k Medical Xpress <img alt="" height="1" width="1"> Alzheimer's Tau protein forms toxic complexes with cell membranes Medical Xpress The brains of patients with Alzheimer's disease contain characteristic tangles inside neurons. These tangles are formed when a protein called Tau aggregates into twisted fibrils. As a result, the neurons' transport systems ... and more »	nmrlearner	Online News	0	11-22-2017 02:01 PM
Tackling infectious disease â?? one protein at a time - Medical Xpress Tackling infectious disease â?? one protein at a time - Medical Xpress http://www.bionmr.com//t0.gstatic.com/images?q=tbn:ANd9GcSQf2rmna6Lj7mu6Vi03e-sET181eWFZI-PxGPbYTvbPUWLIjvCCPQsAHQBN_0-CiVjPNXVaE9O Medical Xpress <img alt="" height="1" width="1"> Tackling infectious disease â?? one protein at a time Medical Xpress Garry Buchko and colleagues used NMR to solve the structure of the protein, which is found in an infection often conveyed by ticks. Credit: SSGCID. This week the team reached a milestone, announcing that its scientists have solved the 3-D structure of ...	nmrlearner	Online News	0	06-10-2017 05:21 PM
Researchers pioneer novel strategy to prevent progression of inflammation ... - Medical Xpress http://www.bionmr.com//t3.gstatic.com/images?q=tbn:ANd9GcQKnycE3BfJpoLZZkOP_IyUFvEYAafrRPY2Hoh9ThFMsQxM02_j9tHzeUfKx-9J0GdQaLlEq5Q Medical Xpress <img alt="" height="1" width="1"> Researchers pioneer novel strategy to prevent progression of inflammation ... Medical Xpress The researchers determined the three-dimensional structures of FAT10 using the state-of-the-art nuclear magnetic resonance (NMR) spectroscopy, and further examined the relationship between the two proteins. Through the use of genetic mutation ... and more » Researchers pioneer novel strategy to prevent...	nmrlearner	Online News	0	02-13-2015 05:31 PM
Protein's structural shift offers clues to tumor suppression and other key ... - Medical Xpress Protein's structural shift offers clues to tumor suppression and other key ... - Medical Xpress <img alt="" height="1" width="1" /> Protein's structural shift offers clues to tumor suppression and other key ... Medical Xpress Using nuclear magnetic resonance (NMR) and other techniques, researchers identified a regulatory mechanism that prompted the NPM1 segment to partially or completely unfold into a single disordered strand of amino acids. The researchers believe that the ... Read here	nmrlearner	Online News	0	07-04-2014 08:28 PM
Researchers identify new protein markers that may improve understanding of ... - Medical Xpress Researchers identify new protein markers that may improve understanding of ... - Medical Xpress <img alt="" height="1" width="1" /> Researchers identify new protein markers that may improve understanding of ... Medical Xpress Testing for GlycA and GlycB by NMR spectroscopy uses signals that arise from the binding of glucose molecules to a variety of circulating inflammatory proteins, especially fibrinogen, Î±1-antichymotrypsin, haptoglobin-1, Î±1-antitrypsin, complement C3 ... and more » Read here	nmrlearner	Online News	0	03-30-2014 06:49 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off