New Tool to Reveal Structure of Proteins - Fars News Agency

		BioNMR > NMR community > Online News
New Tool to Reveal Structure of Proteins - Fars News Agency

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

03-20-2012, 10:37 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,732

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

New Tool to Reveal Structure of Proteins - Fars News Agency

Fars News Agency

New Tool to Reveal Structure of Proteins
Fars News Agency
For roughly a decade, a technique called solid state nuclear magnetic resonance (NMR) spectroscopy has allowed researchers to detect the arrangements of atoms in proteins that defy study by traditional laboratory tools such as X-ray crystallography.

and more »

New Tool to Reveal Structure of Proteins - Fars News Agency
More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
A new tool to reveal structure of proteins - Eureka! Science News A new tool to reveal structure of proteins - Eureka! Science News <img alt="" height="1" width="1" /> A new tool to reveal structure of proteins Eureka! Science News For roughly a decade, a technique called solid state nuclear magnetic resonance (NMR) spectroscopy has allowed researchers to detect the arrangements of atoms in proteins that defy study by traditional laboratory tools such as X-ray crystallography. and more » Read here	nmrlearner	Online News	0	03-19-2012 10:30 PM
iHADAMAC: a complementary tool for sequential resonance assignment of globular and highly disordered proteins iHADAMAC: a complementary tool for sequential resonance assignment of globular and highly disordered proteins Publication year: 2011 Source: Journal of Magnetic Resonance, Available online 9 November 2011</br> SophieFeuerstein, Michael J.Plevin, DieterWillbold, BernhardBrutscher</br> An experiment, iHADAMAC, is presented that yields information on the amino-acid type of individual residues in a protein by editing theH-N correlations into 7 different 2D spectra, each corresponding to a different class of amino-acid types. Amino-acid type discrimination is realized via a Hadamard...	nmrlearner	Journal club	0	11-10-2011 07:38 AM
Biochemists reveal interaction between tumor suppressor protein and chaperone - News-Medical.net Biochemists reveal interaction between tumor suppressor protein and chaperone - News-Medical.net <img alt="" height="1" width="1" /> Biochemists reveal interaction between tumor suppressor protein and chaperone News-Medical.net Using nuclear magnetic resonance (NMR) spectroscopy, the scientists at the Bavarian NMR Center in Garching were able for the first time to characterize the interaction surfaces between Hsp90 and p53 and show that p53 binds to Hsp90 in an already ... Read here	nmrlearner	Online News	0	09-08-2011 08:24 AM
Proteins Reveal Their Secrets Under Pressure - Chemical & Engineering News Proteins Reveal Their Secrets Under Pressure - Chemical & Engineering News http://nt3.ggpht.com/news/tbn/w_rlCzy1Ripc7M/6.jpg Chemical & Engineering News <img alt="" height="1" width="1" /> Proteins Reveal Their Secrets Under Pressure Chemical & Engineering News With the device, the researchers attempted an NMR experiment they call pressure perturbation transient state spectroscopy. The experiment begins with a pressure spike that unfolds a protein in solution in an NMR sample tube; then the protein refolds ...	nmrlearner	Online News	0	08-02-2011 12:25 AM
[NMR tweet] NEWS: Nuclear magnetic resonance with no magnets: Nuclear magnetic resonance (NMR) is a powerful tool for chemic... http://bit.ly/mHddgy NEWS: Nuclear magnetic resonance with no magnets: Nuclear magnetic resonance (NMR) is a powerful tool for chemic... http://bit.ly/mHddgy Published by stephanbecker (Stephan Becker) on 2011-05-18T18:13:29Z Source: Twitter	nmrlearner	Twitter NMR	0	05-18-2011 06:17 PM
[NMR tweet] Nuclear magnetic resonance with no magnets: Nuclear magnetic resonance (NMR) is a powerful tool fo... http://bit.ly/kgaAPQ #science news Nuclear magnetic resonance with no magnets: Nuclear magnetic resonance (NMR) is a powerful tool fo... http://bit.ly/kgaAPQ #science news Published by moonheart85 (Chandan Saud) on 2011-05-18T18:13:29Z Source: Twitter	nmrlearner	Twitter NMR	0	05-18-2011 06:17 PM
[NMR paper] RESCUE: an artificial neural network tool for the NMR spectral assignment of proteins RESCUE: an artificial neural network tool for the NMR spectral assignment of proteins. Related Articles RESCUE: an artificial neural network tool for the NMR spectral assignment of proteins. J Biomol NMR. 1999 Sep;15(1):15-26 Authors: Pons JL, Delsuc MA The assignment of the 1H spectrum of a protein or a polypeptide is the prerequisite for advanced NMR studies. We present here an assignment tool based on the artificial neural network technology, which determines the type of the amino acid from the chemical shift values observed in the 1H...	nmrlearner	Journal club	0	11-18-2010 08:31 PM
Purifying Proteins: Researchers Use NMR To Improve Drug Development - Medical News To Purifying Proteins: Researchers Use NMR To Improve Drug Development - Medical News Today (press release) <img alt="" height="1" width="1" /> Purifying Proteins: Researchers Use NMR To Improve Drug Development Medical News Today (press release) From the NMR data, they were able to determine what part and type of the protein the ligands were binding to and how strongly they would bind. ... and more » Read here	nmrlearner	Online News	0	10-26-2010 08:48 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off