New tool to probe the control of protein production in human cells - Phys.org

		BioNMR > NMR community > Online News
New tool to probe the control of protein production in human cells - Phys.org

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

11-27-2021, 10:43 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

New tool to probe the control of protein production in human cells - Phys.org

New tool to probe the control of protein production in human cells - Phys.org

New tool to probe the control of protein production in human cells Phys.org Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Fixing protein production errors lengthens lifespan - Phys.Org Fixing protein production errors lengthens lifespan - Phys.Org Fixing protein production errors lengthens lifespan Phys.Org Read here	nmrlearner	Online News	0	11-27-2021 10:43 PM
[NMR paper] A Solvatochromic Fluorescent Probe Reveals Polarity Heterogeneity upon Protein Aggregation in Cells A Solvatochromic Fluorescent Probe Reveals Polarity Heterogeneity upon Protein Aggregation in Cells Angewandte Chemie International Edition, Volume 60, Issue 49, Page 25865-25871, December 1, 2021. More...	nmrlearner	Journal club	0	11-25-2021 02:57 PM
Researchers directly measure electrostatic interactions in protein structures in cells - Phys.Org Researchers directly measure electrostatic interactions in protein structures in cells Phys.Org Researchers directly measure electrostatic interactions in protein structures in cells - Phys.Org More...	nmrlearner	Online News	0	11-17-2021 07:58 AM
Mass production of SARS-CoV-2 ORF8 protein using a chemical-inducible system in tobacco BY-2 cells - News-Medical.Net Mass production of SARS-CoV-2 ORF8 protein using a chemical-inducible system in tobacco BY-2 cells - News-Medical.Net Mass production of SARS-CoV-2 ORF8 protein using a chemical-inducible system in tobacco BY-2 cells News-Medical.Net Read here	nmrlearner	Online News	0	10-09-2020 08:31 PM
In-situ measurement of 3-D protein structure inside living eukaryotic cells - Phys.org In-situ measurement of 3-D protein structure inside living eukaryotic cells - Phys.org In-situ measurement of 3-D protein structure inside living eukaryotic cells Phys.org Read here	nmrlearner	Online News	0	08-15-2020 05:51 AM
Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic scale - Phys.Org Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic scale - Phys.Org http://www.bionmr.com//t1.gstatic.com/images?q=tbn:ANd9GcRBtQa7jjiFR1Ka7bIeJtv8GwyoUep-8VjT60fBCPfstugvxkbxBGj14wdtmcsu0NjpeAQ5zKru Phys.Org <img alt="" height="1" width="1"> Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic scale Phys.Org "Just as we are always moving our arms and legs about, proteins are very dynamic. They do not stand still," Polenova says. "These motions are essential to their biological function, and NMR spectroscopy is the only technique...	nmrlearner	Online News	0	12-02-2017 02:54 PM
Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic ... - Phys.Org Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic ... - Phys.Org http://www.bionmr.com//t2.gstatic.com/images?q=tbn:ANd9GcT9L3q8W70RahhoVW6p4h_H8hwG5OrsBRguWtW3kPiqT8wa-znuPREK74WT8UVXzeFKbRdUurxU Phys.Org <img alt="" height="1" width="1"> Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic ... Phys.Org The research team used magic-angle-spinning nuclear magnetic resonance spectrometry (NMR) in the Department of Chemistry and Biochemistry at UD to unveil the structure of the CAP-Gly protein assembled on polymerized microtubules....	nmrlearner	Online News	0	11-26-2015 12:13 AM
[NMR paper] (19) F NMR Spectroscopy as a Probe of Cytoplasmic Viscosity and Weak Protein Interactions in Living Cells. (19) F NMR Spectroscopy as a Probe of Cytoplasmic Viscosity and Weak Protein Interactions in Living Cells. (19) F NMR Spectroscopy as a Probe of Cytoplasmic Viscosity and Weak Protein Interactions in Living Cells. Chemistry. 2013 Aug 6; Authors: Ye Y, Liu X, Zhang Z, Wu Q, Jiang B, Jiang L, Zhang X, Liu M, Pielak GJ, Li C Abstract Protein mobility in living cells is vital for cell function. Both cytosolic viscosity and weak protein-protein interactions affect mobility, but examining viscosity and weak interaction effects is challenging....	nmrlearner	Journal club	0	08-08-2013 03:46 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off