Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic scale - UD Daily

		BioNMR > NMR community > Online News
Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic scale - UD Daily

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

01-07-2019, 05:49 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,732

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic scale - UD Daily

Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic scale - UD Daily

Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic scale UD Daily5:30 p.m., Nov. 24, 2015--A latticework of tiny tubes called microtubules gives your cells their shape and also acts like a railroad track that essential proteins ...

Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
CONFINE-MAS: a magic-angle spinning NMR probe that confines the sample in case of a rotor explosion CONFINE-MAS: a magic-angle spinning NMR probe that confines the sample in case of a rotor explosion Abstract Magic-angle spinning (MAS) is mandatory in solid-state NMR experiments to achieve resolved spectra. In rare cases, instabilities in the rotation or damage of either the rotor or the rotor cap can lead to a so called â??rotor crashâ?? involving a disintegration of the sample container and possibly the release of an aerosol or of dust. We present a modified design of a 3.2Â*mm probe with a confining chamber which in case of a rotor crash...	nmrlearner	Journal club	0	01-07-2019 05:49 AM
Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic scale - Phys.Org Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic scale - Phys.Org http://www.bionmr.com//t1.gstatic.com/images?q=tbn:ANd9GcRBtQa7jjiFR1Ka7bIeJtv8GwyoUep-8VjT60fBCPfstugvxkbxBGj14wdtmcsu0NjpeAQ5zKru Phys.Org <img alt="" height="1" width="1"> Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic scale Phys.Org "Just as we are always moving our arms and legs about, proteins are very dynamic. They do not stand still," Polenova says. "These motions are essential to their biological function, and NMR spectroscopy is the only technique...	nmrlearner	Online News	0	12-02-2017 02:54 PM
Researchers probe brain disease-causing proteins at the atomic ... - Science Daily Researchers probe brain disease-causing proteins at the atomic ... - Science Daily <img alt="" height="1" width="1"> Researchers probe brain disease-causing proteins at the atomic ... Science Daily Researchers studying a protein that causes a hereditary degenerative brain disease in humans have discovered that the human, mouse and hamster forms of ... and more » Read here	nmrlearner	Online News	0	11-07-2017 07:58 AM
[NMR paper] Structural Analysis of Human Cofilin 2/Filamentous Actin Assemblies: Atomic-Resolution Insights from Magic Angle Spinning NMR Spectroscopy. Structural Analysis of Human Cofilin 2/Filamentous Actin Assemblies: Atomic-Resolution Insights from Magic Angle Spinning NMR Spectroscopy. Related Articles Structural Analysis of Human Cofilin 2/Filamentous Actin Assemblies: Atomic-Resolution Insights from Magic Angle Spinning NMR Spectroscopy. Sci Rep. 2017 Mar 17;7:44506 Authors: Yehl J, Kudryashova E, Reisler E, Kudryashov D, Polenova T Abstract Cellular actin dynamics is an essential element of numerous cellular processes, such as cell motility, cell division and...	nmrlearner	Journal club	0	03-19-2017 10:38 PM
Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic scale - UD Daily Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic scale - UD Daily http://www.bionmr.com//t0.gstatic.com/images?q=tbn:ANd9GcT-781wgiL25Wj4lXbDk7r_19UWHOVZ3lHSUaO48tGMGj-ld0mE1LSgPhYcTamEvpxJ90b_7RGo UD Daily <img alt="" height="1" width="1"> Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic scale UD Daily 5:30 p.m., Nov. 24, 2015--A latticework of tiny tubes called microtubules gives your cells their shape and also acts like a railroad track that essential proteins travel on. But if there is a glitch in the connection between...	nmrlearner	Online News	0	07-18-2016 03:40 AM
[NMR paper] Atomic-resolution structure of the CAP-Gly domain of dynactin on polymeric microtubules determined by magic angle spinning NMR spectroscopy. Atomic-resolution structure of the CAP-Gly domain of dynactin on polymeric microtubules determined by magic angle spinning NMR spectroscopy. Atomic-resolution structure of the CAP-Gly domain of dynactin on polymeric microtubules determined by magic angle spinning NMR spectroscopy. Proc Natl Acad Sci U S A. 2015 Nov 24;112(47):14611-6 Authors: Yan S, Guo C, Hou G, Zhang H, Lu X, Williams JC, Polenova T Abstract Microtubules and their associated proteins perform a broad array of essential physiological functions, including...	nmrlearner	Journal club	0	11-26-2015 12:22 PM
Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic ... - Phys.Org Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic ... - Phys.Org http://www.bionmr.com//t2.gstatic.com/images?q=tbn:ANd9GcT9L3q8W70RahhoVW6p4h_H8hwG5OrsBRguWtW3kPiqT8wa-znuPREK74WT8UVXzeFKbRdUurxU Phys.Org <img alt="" height="1" width="1"> Magic-angle-spinning NMR used to probe protein/microtubule assembly at atomic ... Phys.Org The research team used magic-angle-spinning nuclear magnetic resonance spectrometry (NMR) in the Department of Chemistry and Biochemistry at UD to unveil the structure of the CAP-Gly protein assembled on polymerized microtubules....	nmrlearner	Online News	0	11-26-2015 12:13 AM
[NMR paper] Nano-Mole Scale Side-Chain Signal Assignment by 1H-Detected Protein Solid-State NMR by Ultra-Fast Magic-Angle Spinning and Stereo-Array Isotope Labeling. Nano-Mole Scale Side-Chain Signal Assignment by 1H-Detected Protein Solid-State NMR by Ultra-Fast Magic-Angle Spinning and Stereo-Array Isotope Labeling. http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www.plosone.org-images-pone_120x30.png Related Articles Nano-Mole Scale Side-Chain Signal Assignment by 1H-Detected Protein Solid-State NMR by Ultra-Fast Magic-Angle Spinning and Stereo-Array Isotope Labeling. PLoS One. 2015;10(4):e0122714 Authors: Wang S, Parthasarathy S, Nishiyama Y, Endo Y, Nemoto T, Yamauchi K, Asakura T,...	nmrlearner	Journal club	0	04-11-2015 12:04 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off