Lab Chemists Help Find Binding Site of Protein That Allows Plant Growth - Science Daily (press release)

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Lab Chemists Help Find Binding Site of Protein That Allows Plant Growth - Science Daily (press release)

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NMR assignment:

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Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

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Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

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NOEs, other restraints:

Chemical shifts:

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Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

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V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

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Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

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NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

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09-26-2013, 12:14 PM

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Lab Chemists Help Find Binding Site of Protein That Allows Plant Growth - Science Daily (press release)

Lab Chemists Help Find Binding Site of Protein That Allows Plant Growth - Science Daily (press release)

Lab Chemists Help Find Binding Site of Protein That Allows Plant Growth
Science Daily (press release)
A paper describing the discovery, â??Sensitivity-enhanced solid-state NMR detection of expansin's target in plant cell walls,â?? was just published by the Proceedings of the National Academy of Sciences Online Early Edition. Hong and Daniel Cosgrove ...

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