Journal Highlight: Assessment of higher order structure comparability in ... - spectroscopyNOW.com

		BioNMR > NMR community > Online News
Journal Highlight: Assessment of higher order structure comparability in ... - spectroscopyNOW.com

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

06-03-2013, 04:21 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Journal Highlight: Assessment of higher order structure comparability in ... - spectroscopyNOW.com

Journal Highlight: Assessment of higher order structure comparability in ...
spectroscopyNOW.com
Abstract: In this work, we applied nuclear magnetic resonance (NMR) spectroscopy to rapidly assess higher order structure (HOS) comparability in protein samples. Using a variation of the NMR fingerprinting approach described by Panjwani et al. [2010.

Journal Highlight: Assessment of higher order structure comparability in ... - spectroscopyNOW.com
More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Journal Highlight: Utilizing NMR and EPR spectroscopy to probe the role of copper in prion diseases Journal Highlight: Utilizing NMR and EPR spectroscopy to probe the role of copper in prion diseases http://www.spectroscopynow.com/common/images/thumbnails/13e5065f06a.jpgCurrent research on the role of copper in the conformational changes associated with prion diseases are reviewed with emphasis on the latest applications of NMR and EPR spectroscopy to probe the interactions of copper with prion proteins. Read the rest at Spectroscopynow.com	nmrlearner	General	0	04-29-2013 06:02 PM
Journal Highlight: NMR quadrupole liouvillians for arbitrary spin: Exact symbolic expressions and perturbation solutions Journal Highlight: NMR quadrupole liouvillians for arbitrary spin: Exact symbolic expressions and perturbation solutions http://www.spectroscopynow.com/common/images/thumbnails/13dc0c363d3.jpgThe NMR of quadrupolar nuclei with half-integer spins, which is described by treating the quadrupole interaction with second-order perturbation theory, has been elaborated on by calculating the transitions directly without the requirement of knowing the operators and wavefunctions. Read the rest at Spectroscopynow.com	nmrlearner	General	0	04-01-2013 04:23 PM
Journal Highlight: Coupling of a high-resolution monoamine oxidase-A inhibitor assay and HPLC–SPE–NMR for advanced bioactivity profiling of plant extracts Journal Highlight: Coupling of a high-resolution monoamine oxidase-A inhibitor assay and HPLC–SPE–NMR for advanced bioactivity profiling of plant extracts http://www.spectroscopynow.com/common/images/thumbnails/13d26a3428e.jpgA photometric microplate-based high-resolution monoamine oxidase A inhibitor assay was coupled with an HPLC–SPE–tube transfer NMR system for the bioactivity profiling of plant extracts in the search for new antidepressants. Read the rest at Spectroscopynow.com	nmrlearner	General	0	03-04-2013 03:07 PM
Journal Highlight: How to tickle spins with a Fourier Transform NMR spectrometer Journal Highlight: How to tickle spins with a Fourier Transform NMR spectrometer http://www.spectroscopynow.com/common/images/thumbnails/13c920587a1.jpgSpin tickling can readily be achieved in homonuclear systems with Fourier transform NMR spectrometers by applying short pulses in the intervals between the sampling points. Read the rest at Spectroscopynow.com	nmrlearner	General	0	02-04-2013 08:00 PM
Journal Highlight: Determination of free fatty acids in edible oils by 1H NMR spectroscopy Journal Highlight: Determination of free fatty acids in edible oils by 1H NMR spectroscopy http://www.spectroscopynow.com/common/images/thumbnails/13c10b7ddda.jpgA novel proton NMR assay for the determination of free fatty acids in edible oils is a suitable alternative to the acid value method. Source: Spectroscopynow.com	nmrlearner	General	0	02-03-2013 08:49 AM
Journal Highlight: Combined use of filtered and edited 1H NMR spectroscopy to detect 13C-enriched compounds in complex mixtures Journal Highlight: Combined use of filtered and edited 1H NMR spectroscopy to detect 13C-enriched compounds in complex mixtures http://www.spectroscopynow.com/common/images/thumbnails/13b5c5e9785.jpgThe 13C background signal can be distinguished from resonances of 13C-enriched xenobiotics by the absence of a 12C component, detected by combined analysis of 13C-filtered and -edited proton NMR spectra. Source: Spectroscopynow.com	nmrlearner	General	0	02-03-2013 08:49 AM
Journal Highlight: Quantitative NMR: An applicable method for quantitative analysis of medicinal plant extracts and herbal products Journal Highlight: Quantitative NMR: An applicable method for quantitative analysis of medicinal plant extracts and herbal products http://www.spectroscopynow.com/common/images/thumbnails/13abcca009b.jpgA quantitative NMR method has been reported for quantitative analysis of three medicinal plant extracts and their herbal products without the need of authentic standards. Source: Spectroscopynow.com	nmrlearner	General	0	02-03-2013 08:49 AM
3D target: Membrane protein structure - spectroscopyNOW.com 3D target: Membrane protein structure - spectroscopyNOW.com http://www.bionmr.com//nt1.ggpht.com/news/tbn/rfP-uJkLWTqT-M/6.jpg spectroscopyNOW.com <img alt="" height="1" width="1" /> 3D target: Membrane protein structure spectroscopyNOW.com The three-dimensional structure of a complete, unmodified G-protein-coupled receptor in its native, membrane environment under physiological conditions has been obtained NMR spectroscopy. In October, chemists the world over were stunned by the ...	nmrlearner	Online News	0	11-01-2012 10:18 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off