Including the Ensemble of Unstructured Conformations in the Analysis of Protein's Native State by High-Pressure NMR Spectroscopy - Berner - 2024 - Angewandte Chemie International Edition - Wiley Online Library

		BioNMR > NMR community > Online News
Including the Ensemble of Unstructured Conformations in the Analysis of Protein's Native State by High-Pressure NMR Spectroscopy - Berner - 2024 - Angewandte Chemie International Edition - Wiley Online Library

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

Yesterday, 02:13 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,920

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Including the Ensemble of Unstructured Conformations in the Analysis of Protein's Native State by High-Pressure NMR Spectroscopy - Berner - 2024 - Angewandte Chemie International Edition - Wiley Online Library

Including the Ensemble of Unstructured Conformations in the Analysis of Protein's Native State by High-Pressure NMR Spectroscopy - Berner - 2024 - Angewandte Chemie International Edition Wiley Online Library Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Protein NMR Resonance Assignment without Spectral Analysis: 5D SOlid-State Automated Projection SpectroscopY (SO-APSY) - Wiley Online Library Protein NMR Resonance Assignment without Spectral Analysis: 5D SOlid-State Automated Projection SpectroscopY (SO-APSY) - Wiley Online Library Protein NMR Resonance Assignment without Spectral Analysis: 5D SOlid-State Automated Projection SpectroscopY (SO-APSY) Wiley Online Library Read here	nmrlearner	Online News	0	02-09-2025 06:32 AM
Heterochromatin Protein HP1? Gelation Dynamics Revealed by Solid-State NMR Spectroscopy - Wiley Online Library Heterochromatin Protein HP1? Gelation Dynamics Revealed by Solid-State NMR Spectroscopy - Wiley Online Library Heterochromatin Protein HP1? Gelation Dynamics Revealed by Solid-State NMR Spectroscopy Wiley Online Library Read here	nmrlearner	Online News	0	12-27-2024 03:40 PM
NMR Spectroscopy of the Main Protease of SARS-CoV-2 and Fragment-Based Screening Identify Three Protein Hotspots and an Antiviral Fragment - Cantrelle - 2021 - Angewandte Chemie International Edition - Wiley Online Library NMR Spectroscopy of the Main Protease of SARS-CoV-2 and Fragment-Based Screening Identify Three Protein Hotspots and an Antiviral Fragment - Cantrelle - 2021 - Angewandte Chemie International Edition - Wiley Online Library NMR Spectroscopy of the Main Protease of SARS-CoV-2 and Fragment-Based Screening Identify Three Protein Hotspots and an Antiviral Fragment - Cantrelle - 2021 - Angewandte Chemie International Edition Wiley Online Library Read here	nmrlearner	Online News	0	12-16-2024 05:09 PM
NMR Spectroscopy of the Main Protease of SARS-CoV-2 and Fragment-Based Screening Identify Three Protein Hotspots and an Antiviral Fragment - Cantrelle - 2021 - Angewandte Chemie International Edition - Wiley NMR Spectroscopy of the Main Protease of SARS-CoV-2 and Fragment-Based Screening Identify Three Protein Hotspots and an Antiviral Fragment - Cantrelle - 2021 - Angewandte Chemie International Edition - Wiley NMR Spectroscopy of the Main Protease of SARS-CoV-2 and Fragment-Based Screening Identify Three Protein Hotspots and an Antiviral Fragment - Cantrelle - 2021 - Angewandte Chemie International Edition Wiley Read here	nmrlearner	Online News	0	07-24-2024 08:25 AM
[NMR paper] Including the Ensemble of Unstructured Conformations in the Analysis of Protein's Native State by High-Pressure NMR Spectroscopy Including the Ensemble of Unstructured Conformations in the Analysis of Protein's Native State by High-Pressure NMR Spectroscopy The analysis of pressure induced changes in the chemical shift of proteins allows statements on structural fluctuations proteins exhibit at ambient pressure. The inherent issue of separating general pressure effects from structural related effects on the pressure dependence of chemical shifts has so far been addressed by considering the characteristics of random coil peptides on increasing pressure. In this work, chemically and pressure denatured states of the...	nmrlearner	Journal club	0	04-25-2024 04:15 AM
SARS-CoV-2 variants preferentially emerge at intrinsically disordered protein sites helping immune evasion - Quaglia - - The FEBS Journal - Wiley Online Library - Wiley SARS-CoV-2 variants preferentially emerge at intrinsically disordered protein sites helping immune evasion - Quaglia - - The FEBS Journal - Wiley Online Library - Wiley SARS-CoV-2 variants preferentially emerge at intrinsically disordered protein sites helping immune evasion - Quaglia - - The FEBS Journal - Wiley Online Library Wiley Read here	nmrlearner	Online News	0	07-24-2022 04:03 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off