Herpes 3D: NMR reveals viral protein hijacking - spectroscopyNOW.com

		BioNMR > NMR community > Online News
Herpes 3D: NMR reveals viral protein hijacking - spectroscopyNOW.com

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

01-15-2011, 02:09 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Herpes 3D: NMR reveals viral protein hijacking - spectroscopyNOW.com

Herpes 3D: NMR reveals viral protein hijacking - spectroscopyNOW.com

Herpes 3D: NMR reveals viral protein hijacking
spectroscopyNOW.com
UK scientists have used solution-state NMR spectroscopy for the first time to develop a 3D picture of a herpes virus protein interacting with a key part of ...

Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Protein NMR Spectroscopy: Practical Techniques and Applications - spectroscopyNOW.com Protein NMR Spectroscopy: Practical Techniques and Applications - spectroscopyNOW.com <img alt="" height="1" width="1" /> Protein NMR Spectroscopy: Practical Techniques and Applications spectroscopyNOW.com Nuclear Magnetic Resonance (NMR) spectroscopy is a powerful technique in structural biology for obtaining high resolution 3-D structures of proteins, second only, and complementary to X-ray crystallography. Molecules are studied in solution, ... and more » Read here	nmrlearner	Online News	0	06-30-2011 05:06 PM
Herpes hitches a ride on cellular protein - LabnewsOnline Herpes hitches a ride on cellular protein - LabnewsOnline http://nt2.ggpht.com/news/tbn/jpBsg0BYBHimsM/6.jpg LabnewsOnline <img alt="" height="1" width="1" /> Herpes hitches a ride on cellular protein LabnewsOnline Using NMR, the team from the University of Manchester were able to produce images of a herpes protein interacting with a mouse cellular protein. ...	nmrlearner	Online News	0	02-04-2011 07:12 PM
Herpes 3D: NMR reveals viral protein hijacking Herpes 3D: NMR reveals viral protein hijacking UK scientists have used NMR for the first time to develop a 3D picture of a herpes virus protein interacting with a key part of the human cellular machinery. The study improves our understanding of how the virus hijacks human cells and could eventually lead to new targets for drug therapy. Source: Spectroscopynow.com	nmrlearner	General	0	01-15-2011 02:09 AM
[NMR paper] NMR assignment of the apo and peptide-bound SH2 domain from the Rous sarcoma viral protein Src. NMR assignment of the apo and peptide-bound SH2 domain from the Rous sarcoma viral protein Src. Related Articles NMR assignment of the apo and peptide-bound SH2 domain from the Rous sarcoma viral protein Src. J Biomol NMR. 2005 Aug;32(4):339 Authors: Taylor JD, Fawaz RR, Ababou A, Williams MA, Ladbury JE	nmrlearner	Journal club	0	12-01-2010 06:56 PM
[NMR paper] NMR studies of a viral protein that mimics the regulators of complement activation. NMR studies of a viral protein that mimics the regulators of complement activation. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-PubMedLink.gif Related Articles NMR studies of a viral protein that mimics the regulators of complement activation. J Mol Biol. 1997 Sep 19;272(2):253-65 Authors: Wiles AP, Shaw G, Bright J, Perczel A, Campbell ID, Barlow PN Vaccinia virus complement control protein (VCP) is a 243-residue protein that is similar in sequence to the regulators of complement activation; its...	nmrlearner	Journal club	0	08-22-2010 05:08 PM
[NMR paper] Computer-aided assignment of the 1H-NMR spectrum of the viral-protein-genome-linked p Computer-aided assignment of the 1H-NMR spectrum of the viral-protein-genome-linked polypeptide from cowpea mosaic virus. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www3.interscience.wiley.com-aboutus-images-wiley_interscience_pubmed_logo_FREE_120x27.gif Related Articles Computer-aided assignment of the 1H-NMR spectrum of the viral-protein-genome-linked polypeptide from cowpea mosaic virus. Eur J Biochem. 1990 Jul 5;190(3):583-91 Authors: van de Ven FJ, Lycksell PO, van Kammen A, Hilbers CW The 1H-NMR spectrum of the...	nmrlearner	Journal club	0	08-21-2010 11:04 PM
Aqueous asymmetric acid - spectroscopyNOW.com Aqueous asymmetric acid - spectroscopyNOW.com <img alt="" height="1" width="1" /> Aqueous asymmetric acid spectroscopyNOW.com The first example of asymmetric catalysis with a Brønsted acid in aqueous solution has been reported by German chemists who used NMR spectroscopy and mass ... Read here	nmrlearner	Online News	0	08-16-2010 03:50 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off