Dynamic tuning of FRET in a green fluorescent protein biosensor - Science Advances

		BioNMR > NMR community > Online News
Dynamic tuning of FRET in a green fluorescent protein biosensor - Science Advances

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

02-29-2020, 09:52 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,734

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Dynamic tuning of FRET in a green fluorescent protein biosensor - Science Advances

Dynamic tuning of FRET in a green fluorescent protein biosensor - Science Advances

Dynamic tuning of FRET in a green fluorescent protein biosensor Science Advances Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Light-induced control of protein destruction by opto-PROTAC - Science Advances Light-induced control of protein destruction by opto-PROTAC - Science Advances Light-induced control of protein destruction by opto-PROTAC Science Advances Read here	nmrlearner	Online News	0	02-29-2020 09:52 PM
[NMR paper] A Single Atom Change Facilitates the Membrane Transport of Green Fluorescent Proteins in Mammalian Cells A Single Atom Change Facilitates the Membrane Transport of Green Fluorescent Proteins in Mammalian Cells Angewandte Chemie International Edition, EarlyView. More...	nmrlearner	Journal club	0	05-09-2019 05:55 AM
Blind protein structure prediction using accelerated free-energy simulations - Science Advances Blind protein structure prediction using accelerated free-energy simulations - Science Advances Blind protein structure prediction using accelerated free-energy simulations Science AdvancesWe report a key proof of principle of a new acceleration method for predicting protein structures by molecular ... Read here	nmrlearner	Online News	0	04-29-2019 11:03 AM
The neuronal S100B protein is a calcium-tuned suppressor of amyloid-? aggregation - Science Advances The neuronal S100B protein is a calcium-tuned suppressor of amyloid-? aggregation - Science Advances The neuronal S100B protein is a calcium-tuned suppressor of amyloid-? aggregation Science AdvancesAmyloid-? (A?) aggregation and neuroinflammation are consistent features in Alzheimer's disease (AD) and strong candidates for the initiation of ... Read here	nmrlearner	Online News	0	04-25-2019 05:39 PM
The neuronal S100B protein is a calcium-tuned suppressor of amyloid-β aggregation - Science Advances The neuronal S100B protein is a calcium-tuned suppressor of amyloid-β aggregation - Science Advances <img alt="" height="1" width="1"> The neuronal S100B protein is a calcium-tuned suppressor of amyloid-β aggregation Science Advances We further speculated that the peak disappearances might also be caused either by the formation of a multimeric complex that is too large to be detected in the NMR experiments (although no precipitation was visible in the NMR titration experiments) or, ... Read here	nmrlearner	Online News	0	07-06-2018 09:40 AM
[ASAP] Coupling Green Fluorescent Protein Expression with Chemical Modification to Probe Functionally Relevant Riboswitch Conformations in Live Bacteria Coupling Green Fluorescent Protein Expression with Chemical Modification to Probe Functionally Relevant Riboswitch Conformations in Live Bacteria https://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.8b00316/20180626/images/medium/bi-2018-003163_0005.gif Biochemistry DOI: 10.1021/acs.biochem.8b00316 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/Etm4Uq6nj6M More...	nmrlearner	Journal club	0	06-27-2018 01:51 AM
Protein Science by DNA Sequencing: How Advances in Molecular Biology Are Accelerating Biochemistry Protein Science by DNA Sequencing: How Advances in Molecular Biology Are Accelerating Biochemistry http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.7b00886/20171020/images/medium/bi-2017-008868_0004.gif Biochemistry DOI: 10.1021/acs.biochem.7b00886 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/vJJECwRnRgQ More...	nmrlearner	Journal club	0	10-24-2017 01:41 AM
[NMR paper] A general mechanism of photoconversion of green-to-red fluorescent proteins based on blue and infrared light reduces phototoxicity in live-cell single-molecule imaging A general mechanism of photoconversion of green-to-red fluorescent proteins based on blue and infrared light reduces phototoxicity in live-cell single-molecule imaging Photoconversion of fluorescent proteins by blue and complementary near-infrared light, termed primed conversion (PC), is a mechanism recently discovered for Dendra2. We demonstrate that controlling the conformation of arginine at residue 66 by threonine at residue 69 of fluorescent proteins from Anthozoan families (Dendra2, mMaple, Eos, mKikGR, pcDronpa protein families) represents a general route to facilitate PC....	nmrlearner	Journal club	0	06-02-2017 08:33 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off