Discovery of plant proteins may boost agricultural yields, biofuel ... - R & D Magazine

		BioNMR > NMR community > Online News
Discovery of plant proteins may boost agricultural yields, biofuel ... - R & D Magazine

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

06-13-2012, 11:34 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,732

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Discovery of plant proteins may boost agricultural yields, biofuel ... - R & D Magazine

Discovery of plant proteins may boost agricultural yields, biofuel ... - R & D Magazine

Discovery of plant proteins may boost agricultural yields, biofuel ...
R & D Magazine
They dubbed these fatty-acid binding proteins FAP1, FAP2, and FAP3. ... next week of a new 0.75-mm solid state nuclear magnetic resonance (NMR) probe.

and more »
Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Speeding up drug discovery with rapid 3D mapping of proteins - HealthCanal.com <img alt="" height="1" width="1" /> Speeding up drug discovery with rapid 3D mapping of proteins HealthCanal.com Scientists, Christian Klammt, Senyon Choe and Innokentiy Maslennikov using a nuclear magnetic resonance spectroscopy for structural studies of membrane proteins. The cell-free method also allowed them to easily add labeled amino acids into the ... Speeding up drug discovery with rapid 3-D mapping of proteinsPhys.Org all 6 news articles » Speeding up drug discovery with rapid 3D mapping of proteins - HealthCanal.com More...	nmrlearner	Online News	0	05-31-2012 05:03 PM
Speeding Up Drug Discovery with Rapid 3D Mapping of Proteins - Lab Manager Magazine <img alt="" height="1" width="1" /> Speeding Up Drug Discovery with Rapid 3D Mapping of Proteins Lab Manager Magazine These amino acids gave off telltale structural clues when analyzed with nuclear magnetic resonance spectroscopy, a method for using the magnetic properties of atoms to determine a molecule's physical and chemical properties. "It was very difficult and ... and more » Speeding Up Drug Discovery with Rapid 3D Mapping of Proteins - Lab Manager Magazine More...	nmrlearner	Online News	0	05-31-2012 03:59 AM
Speeding up drug discovery with rapid 3-D mapping of proteins - Phys.Org <img alt="" height="1" width="1" /> Speeding up drug discovery with rapid 3-D mapping of proteins Phys.Org These amino acids gave off telltale structural clues when analyzed with nuclear magnetic resonance spectroscopy, a method for using the magnetic properties of atoms to determine a molecule's physical and chemical properties. "It was very difficult and ... and more » Speeding up drug discovery with rapid 3-D mapping of proteins - Phys.Org More...	nmrlearner	Online News	0	05-30-2012 03:00 PM
A New Tool to Reveal Structure of Proteins - Lab Manager Magazine A New Tool to Reveal Structure of Proteins - Lab Manager Magazine <img alt="" height="1" width="1" /> A New Tool to Reveal Structure of Proteins Lab Manager Magazine For roughly a decade, a technique called solid state nuclear magnetic resonance (NMR) spectroscopy has allowed researchers to detect the arrangements of atoms in proteins that defy study by traditional laboratory tools such as X-ray crystallography. and more » Read here	nmrlearner	Online News	0	03-20-2012 10:52 PM
[NMR tweet] nuclear magnetic resonance (NMR) is used to determine structures, it yields info on dynamics of proteins nuclear magnetic resonance (NMR) is used to determine structures, it yields info on dynamics of proteins Published by Abbkr (Sadeeq sheshe) on 2011-08-05T20:01:29Z Source: Twitter	nmrlearner	Twitter NMR	1	08-23-2011 02:49 AM
3D Proteins: Getting the Big Picture - Drug Discovery & Development 3D Proteins: Getting the Big Picture - Drug Discovery & Development http://nt3.ggpht.com/news/tbn/k64MPYPXLU8xiM/6.jpg Drug Discovery & Development <img alt="" height="1" width="1" /> 3D Proteins: Getting the Big Picture Drug Discovery & Development For decades, with funding from the National Science Foundation (NSF), Hinton has used nuclear magnetic resonance (NMR) to look at protein structure and function. But he wanted to find a way to educate and engage students about his discoveries. ... and more »	nmrlearner	Online News	0	05-10-2011 07:17 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off