Design and characterization of a protein fold switching network - Nature.com

		BioNMR > NMR community > Online News
Design and characterization of a protein fold switching network - Nature.com

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

01-27-2023, 05:53 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,778

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Design and characterization of a protein fold switching network - Nature.com

Design and characterization of a protein fold switching network - Nature.com

Design and characterization of a protein fold switching network Nature.com Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Assistant Professor in Protein Design & Engineering - Nature.com Assistant Professor in Protein Design & Engineering - Nature.com Assistant Professor in Protein Design & Engineering Nature.com Read here	nmrlearner	Online News	0	05-31-2022 11:00 PM
Study reveals evolutionary origins of fold-switching protein \| National Academy of Sciences - pnas.org Study reveals evolutionary origins of fold-switching protein \| National Academy of Sciences - pnas.org Study reveals evolutionary origins of fold-switching protein \| National Academy of Sciences pnas.org Read here	nmrlearner	Online News	0	04-10-2021 03:40 AM
Study reveals evolutionary origins of fold-switching protein - pnas.org Study reveals evolutionary origins of fold-switching protein pnas.org Study reveals evolutionary origins of fold-switching protein - pnas.org More...	nmrlearner	Online News	0	01-15-2021 04:25 PM
Evolution of fold switching in a metamorphic protein - Science Magazine Evolution of fold switching in a metamorphic protein Science Magazine Evolution of fold switching in a metamorphic protein - Science Magazine More...	nmrlearner	Online News	0	01-13-2021 08:38 AM
Evolution of fold switching in a metamorphic protein - Science Magazine Evolution of fold switching in a metamorphic protein - Science Magazine Evolution of fold switching in a metamorphic protein Science Magazine Read here	nmrlearner	Online News	0	01-02-2021 04:52 PM
Evolution of fold switching in a metamorphic protein - Science Magazine Evolution of fold switching in a metamorphic protein Science Magazine Evolution of fold switching in a metamorphic protein - Science Magazine More...	nmrlearner	Online News	0	01-01-2021 04:24 AM
Evolution of fold switching in a metamorphic protein - Science Magazine Evolution of fold switching in a metamorphic protein - Science Magazine Evolution of fold switching in a metamorphic protein Science Magazine Read here	nmrlearner	Online News	0	01-01-2021 04:24 AM
Expanding the space of protein geometries by computational design of de novo fold families - Science Magazine Expanding the space of protein geometries by computational design of de novo fold families - Science Magazine Expanding the space of protein geometries by computational design of de novo fold families Science Magazine Read here	nmrlearner	Online News	0	08-27-2020 07:27 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off