DeepMind's AlphaFold2 AI Solves 50-Year-Old Biology Challenge - InfoQ.com

		BioNMR > NMR community > Online News
DeepMind's AlphaFold2 AI Solves 50-Year-Old Biology Challenge - InfoQ.com

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

01-06-2021, 07:11 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

DeepMind's AlphaFold2 AI Solves 50-Year-Old Biology Challenge - InfoQ.com

DeepMind's AlphaFold2 AI Solves 50-Year-Old Biology Challenge InfoQ.com
DeepMind's AlphaFold2 AI Solves 50-Year-Old Biology Challenge - InfoQ.com
More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
DeepMind's AI Makes Gigantic Leap in Solving Protein Structures - Scientific American DeepMind's AI Makes Gigantic Leap in Solving Protein Structures Scientific American DeepMind's AI Makes Gigantic Leap in Solving Protein Structures - Scientific American More...	nmrlearner	Online News	0	12-12-2020 06:54 PM
DeepMind AI Predicts Protein Structure \| by Gunnar De Winter \| Predict \| Dec, 2020 - Medium DeepMind AI Predicts Protein Structure \| by Gunnar De Winter \| Predict \| Dec, 2020 Medium DeepMind AI Predicts Protein Structure \| by Gunnar De Winter \| Predict \| Dec, 2020 - Medium More...	nmrlearner	Online News	0	12-09-2020 10:06 AM
'It will change everything': DeepMind's AI makes gigantic leap in solving protein structures - Nature.com 'It will change everything': DeepMind's AI makes gigantic leap in solving protein structures Nature.com 'It will change everything': DeepMind's AI makes gigantic leap in solving protein structures - Nature.com More...	nmrlearner	Online News	0	12-03-2020 09:00 AM
AlphaFold Algorithm Predicts COVID-19 Protein Structures - InfoQ.com AlphaFold Algorithm Predicts COVID-19 Protein Structures InfoQ.com AlphaFold Algorithm Predicts COVID-19 Protein Structures - InfoQ.com More...	nmrlearner	Online News	0	04-01-2020 12:01 AM
NMR solves retroviral mystery: Avian Sarcoma Virus NMR solves retroviral mystery: Avian Sarcoma Virus http://www.spectroscopynow.com/common/images/thumbnails/168279f5f55.jpgNuclear magnetic resonance (NMR) spectroscopy has been used to reveal molecular details of a key step in retroviral growth within the cell. The study shows how the matrix domain of the avian sarcoma virus, or ASV, Gag protein binds to certain phospholipids, which are critical to binding to the plasma membrane of a cell for viral replication. Read the rest at Spectroscopynow.com	nmrlearner	General	0	03-24-2019 10:41 PM
[NMR paper] The effects of acute lipopolysaccharide challenge on dairy goat liver metabolism assessed with (1) HNMR metabonomics. The effects of acute lipopolysaccharide challenge on dairy goat liver metabolism assessed with (1) HNMR metabonomics. Related Articles The effects of acute lipopolysaccharide challenge on dairy goat liver metabolism assessed with (1) HNMR metabonomics. J Anim Physiol Anim Nutr (Berl). 2016 Feb 5; Authors: Wang LF, Jia SD, Yang GQ, Liu RY, Yang GY, Li M, Zhu HS, Wang YY, Han LQ Abstract	nmrlearner	Journal club	0	02-06-2016 03:10 PM
Monthly challenge: identify compound Attached will be a spectrum. Feel free to start by guessing classes or even the identity based off of the 1H I will post more spectra as the day goes on and reveal the answer tomorrow Good luck!	Sabomnim7	NMR Questions and Answers	0	02-04-2014 01:36 AM
[NMR paper] Molecular dynamics simulations of protein G challenge NMR-derived correlated backbone Molecular dynamics simulations of protein G challenge NMR-derived correlated backbone motions. Related Articles Molecular dynamics simulations of protein G challenge NMR-derived correlated backbone motions. Angew Chem Int Ed Engl. 2005 May 30;44(22):3394-9 Authors: Lange OF, Grubmüller H, de Groot BL	nmrlearner	Journal club	0	11-25-2010 08:21 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off