Characterization of membrane protein function by solid-state NMR spectroscopy - ScienceDirect.com

		BioNMR > NMR community > Online News
Characterization of membrane protein function by solid-state NMR spectroscopy - ScienceDirect.com

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

04-17-2024, 03:38 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,734

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Characterization of membrane protein function by solid-state NMR spectroscopy - ScienceDirect.com

Characterization of membrane protein function by solid-state NMR spectroscopy - ScienceDirect.com

Characterization of membrane protein function by solid-state NMR spectroscopy ScienceDirect.com Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Dynamics properties of membrane proteins in native cell membranes revealed by solid-state NMR spectroscopy - sciencedirect.com Dynamics properties of membrane proteins in native cell membranes revealed by solid-state NMR spectroscopy - sciencedirect.com Dynamics properties of membrane proteins in native cell membranes revealed by solid-state NMR spectroscopy sciencedirect.com Read here	nmrlearner	Online News	0	02-18-2024 12:10 AM
Solid-state NMR – a complementary technique for protein framework characterization - ScienceDirect Solid-state NMR – a complementary technique for protein framework characterization - ScienceDirect Solid-state NMR – a complementary technique for protein framework characterization ScienceDirect Read here	nmrlearner	Online News	0	12-28-2023 10:50 PM
Advanced solid-state NMR techniques for characterization of membrane protein structure and dynamics: Application to ... - ScienceDirect Advanced solid-state NMR techniques for characterization of membrane protein structure and dynamics: Application to ... - ScienceDirect Advanced solid-state NMR techniques for characterization of membrane protein structure and dynamics: Application to ... ScienceDirect Read here	nmrlearner	Online News	0	12-28-2023 10:50 PM
Correlating lipid bilayer fluidity with sensitivity and resolution of polytopic membrane protein spectra by solid-state NMR ... - ScienceDirect Correlating lipid bilayer fluidity with sensitivity and resolution of polytopic membrane protein spectra by solid-state NMR ... - ScienceDirect Correlating lipid bilayer fluidity with sensitivity and resolution of polytopic membrane protein spectra by solid-state NMR ... ScienceDirect Read here	nmrlearner	Online News	0	12-28-2023 10:50 PM
Characterization of Membrane Proteins in Isolated Native Cellular Membranes by Dynamic Nuclear Polarization Solid-State NMR Spectroscopy without Purification and Reconstitution From The DNP-NMR Blog: Characterization of Membrane Proteins in Isolated Native Cellular Membranes by Dynamic Nuclear Polarization Solid-State NMR Spectroscopy without Purification and Reconstitution Jacso, T., et al., Characterization of Membrane Proteins in Isolated Native Cellular Membranes by Dynamic Nuclear Polarization Solid-State NMR Spectroscopy without Purification and Reconstitution. Angewandte Chemie, 2012. 124(2): p. 447-450. http://dx.doi.org/10.1002/ange.201104987	nmrlearner	News from NMR blogs	0	12-31-2015 12:20 AM
[NMR paper] Characterization of membrane protein function by solid-state NMR spectroscopy. Characterization of membrane protein function by solid-state NMR spectroscopy. Characterization of membrane protein function by solid-state NMR spectroscopy. Curr Opin Struct Biol. 2014 Apr 25;27C:48-55 Authors: Baker LA, Baldus M Abstract Membrane proteins are an important class of biological molecules whose association with lipid bilayers and intrinsic molecular mobility can complicate their structural study by high-resolution methods. As different experimental techniques require different membrane mimetics, it can be...	nmrlearner	Journal club	0	05-29-2014 09:35 PM
Characterization of membrane protein function by solid-state NMR spectroscopy Characterization of membrane protein function by solid-state NMR spectroscopy Publication date: August 2014 Source:Current Opinion in Structural Biology, Volume 27</br> Author(s): Lindsay A Baker , Marc Baldus</br> Membrane proteins are an important class of biological molecules whose association with lipid bilayers and intrinsic molecular mobility can complicate their structural study by high-resolution methods. As different experimental techniques require different membrane mimetics, it can be challenging to relate membrane protein structure to function. This...	nmrlearner	Journal club	0	05-25-2014 06:31 PM
Recent contributions from solid-state NMR to the understanding of membrane protein structure and function. Recent contributions from solid-state NMR to the understanding of membrane protein structure and function. Recent contributions from solid-state NMR to the understanding of membrane protein structure and function. Curr Opin Chem Biol. 2011 Aug 19; Authors: Judge PJ, Watts A Abstract The plasma membrane functions as a semi-permeable barrier, defining the interior (or cytoplasm) of an individual cell. This highly dynamic and complex macromolecular assembly comprises predominantly lipids and proteins held together by entropic forces and...	nmrlearner	Journal club	0	08-25-2011 04:10 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off