Catching Nanodiscs - Genetic Engineering & Biotechnology News

		BioNMR > NMR community > Online News
Catching Nanodiscs - Genetic Engineering & Biotechnology News

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

09-19-2014, 03:07 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,715

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Catching Nanodiscs - Genetic Engineering & Biotechnology News

Genetic Engineering & Biotechnology News

Catching Nanodiscs
Genetic Engineering & Biotechnology News
Typical methods applied to study proteinâ??glycan interactions are X-ray diffraction, nuclear magnetic resonance, calorimetry, equilibrium dialysis, and enzyme-linked immunosorbent assay. However, limited solubility of glycolipids and low affinities of ...

Catching Nanodiscs - Genetic Engineering & Biotechnology News
More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Novel Technique Measures Structurally Modified Proteins - Genetic Engineering & Biotechnology News <img alt="" height="1" width="1" /> Novel Technique Measures Structurally Modified Proteins Genetic Engineering & Biotechnology News ... that although there is a series of techniques to study structurally modified proteins, such as x-ray crystallography, nuclear magnetic resonance spectroscopy, and other spectroscopic techniques, they cannot be used to analyze complex biological ... Novel Technique Measures Structurally Modified Proteins - Genetic Engineering & Biotechnology News More...	nmrlearner	Online News	0	09-15-2014 07:13 PM
The Right Resin Means A Purer Protein - Genetic Engineering News The Right Resin Means A Purer Protein - Genetic Engineering News <img alt="" height="1" width="1" /> The Right Resin Means A Purer Protein Genetic Engineering News Steven Cramer, Ph.D., a professor of chemical and biological engineering at Rensselaer Polytechnic Institute, is using biophysical tools (NMR, SPR, and AFM), molecular simulations, coarse-grain modeling, and â??a lot of chromatographyâ?? to develop models ... Read here	nmrlearner	Online News	0	04-15-2014 11:00 PM
Protein-Specific Discovery Strategies - Genetic Engineering News Protein-Specific Discovery Strategies - Genetic Engineering News <img alt="" height="1" width="1" /> Protein-Specific Discovery Strategies Genetic Engineering News â??The most challenging aspect is finding ways to express and prepare labeled G-protein-coupled receptors for NMR studies, so that we can learn about the timescales of conformational changes,â?? notes Dr. Kobilka. Structure-function relationship studies ... Read here	nmrlearner	Online News	0	03-17-2014 07:23 PM
Probing Watery Films to Reveal Contours of Membrane Proteins - Genetic Engineering News Probing Watery Films to Reveal Contours of Membrane Proteins - Genetic Engineering News <img alt="" height="1" width="1" /> Probing Watery Films to Reveal Contours of Membrane Proteins Genetic Engineering News ... of membrane-embedded and membrane-associating proteins. The tool, a form of NMR relaxometry, is used to measure the water dynamics gradient above and across the lipid bilayer. According to the researchers, this gradient is an intrinsic rulerâ??it ... Read here	nmrlearner	Online News	0	10-06-2013 06:11 AM
Bruker and Berkeley Lab Combine NMR with SAXS for Analyzing Large Protein ... - Genetic Engineering News http://nt1.ggpht.com/news/tbn/pbujffOLTN-5EM/6.jpg SunHerald.com <img alt="" height="1" width="1" /> Bruker and Berkeley Lab Combine NMR with SAXS for Analyzing Large Protein ... Genetic Engineering News Bruker and Lawrence Berkeley National Laboratory are collaborating to develop structural biology methods and tools that integrate small-angle x-ray scattering (SAXS) technology with nuclear magnetic resonance (NMR). The aim is to generate a set of data ... Bruker and Lawrence Berkeley National Laboratory Collaborate on Novel ...MarketWatch (press release) all 14 news articles »	nmrlearner	Online News	0	11-11-2011 08:26 AM
Bruker and Berkeley Lab Combine NMR with SAXS for Analyzing Large Protein ... - Genetic Engineering News Bruker and Berkeley Lab Combine NMR with SAXS for Analyzing Large Protein ... - Genetic Engineering News http://nt1.ggpht.com/news/tbn/pbujffOLTN-5EM/6.jpg SunHerald.com <img alt="" height="1" width="1" /> Bruker and Berkeley Lab Combine NMR with SAXS for Analyzing Large Protein ... Genetic Engineering News The aim is to generate a set of data analysis algorithms for determining the structures of larger, multi-domain proteins and protein complexes with DNA, RNA or other proteins. The organizations claim that combining the NMR-derived 3-dimensional atomic ... Bruker and Lawrence...	nmrlearner	Online News	0	11-10-2011 08:09 PM
Mass Spec Dominating Protein Profiling - Genetic Engineering News <img alt="" height="1" width="1" /> Mass Spec Dominating Protein Profiling Genetic Engineering News â??In the field of proteomics today, the current methods of choice for molecular characterization are liquid chromatography combined with mass spectrometry, tandem mass spec, and nuclear magnetic resonance mass spectrometry,â?? said James Langridge, Ph.D., ... Mass Spec Dominating Protein Profiling - Genetic Engineering News More...	nmrlearner	Online News	0	09-01-2011 07:23 PM
Biophysical Society names 2011 award recipients - Genetic Engineering News (press rel Biophysical Society names 2011 award recipients - Genetic Engineering News (press release) <img alt="" height="1" width="1" /> Biophysical Society names 2011 award recipients Genetic Engineering News (press release) ... membrane protein biochemistry. Eric Oldfield, University of Illinois, will be awarded the Avanti Award in Lipids for his pioneering research using NMR ... and more » Read here	nmrlearner	Online News	0	09-04-2010 06:53 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off