Brown-led research divines structure for class of proteins - Science Centric

		BioNMR > NMR community > Online News
Brown-led research divines structure for class of proteins - Science Centric

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

09-09-2010, 12:29 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,780

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Brown-led research divines structure for class of proteins - Science Centric

Brown-led research divines structure for class of proteins - Science Centric

Brown-led research divines structure for class of proteins
Science Centric
With I-2, which instructs cells to divide, they used nuclear magnetic resonance spectroscopy to create ensemble calculations for the protein in its free and ...

and more »
Read More

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
NMR tenure track position at Brown University NMR tenure track position at Brown University Structural Biology Faculty Position - Assistant Professor The Department of Molecular Pharmacology, Physiology & Biotechnology at Brown University announces the opening of a faculty position at the rank of Assistant Professor, effective July 1, 2012. Qualifications include a Ph.D. and/or M.D. degree with relevant postdoctoral research training and a record of excellence in research. The successful applicant will be an experimentalist in the area of NMR spectroscopy who will be expected to pursue an independent,	nmrlearner	Job marketplace	0	01-11-2012 04:10 PM
Scripps Research scientists paint new picture of dance between protein and ... - Science Codex Scripps Research scientists paint new picture of dance between protein and ... - Science Codex http://nt1.ggpht.com/news/tbn/AWGm6J5nlWqsBM/6.jpg Science Codex <img alt="" height="1" width="1" /> Scripps Research scientists paint new picture of dance between protein and ... Science Codex The new studyâ??which used a number of complementary technologies including NMR spectroscopy and hydrogen/deuterium exchange (HDX) coupled to mass spectrometery, combined with previous x-ray crystallography analysesâ??provides detailed insights into the ... and more »	nmrlearner	Online News	0	01-11-2012 04:03 AM
Should We Still Be LDL-Centric? - Medscape <img alt="" height="1" width="1" /> Should We Still Be LDL-Centric? Medscape You can use nuclear magnetic resonance, and electrophoresis to get particle size. The data are leaning more towards particle number at this point. If you take that information, or if you take apolipoprotein-B information -- Alan Sniderman in Canada is ... Should We Still Be LDL-Centric? - Medscape More...	nmrlearner	Online News	0	12-29-2011 10:55 AM
New method reveals protein structure - The Brown Daily Herald <img alt="" height="1" width="1" /> New method reveals protein structure The Brown Daily Herald Their new method for determining protein structure integrates small-angle X-ray scattering and nuclear magnetic resonance spectroscopy, allowing a greater level of detail and representing "a new wavefront of biology," said Dorothy Koveal GS, ... New method reveals protein structure - The Brown Daily Herald More...	nmrlearner	Online News	0	11-11-2011 08:26 AM
[NMR paper] Solution structure of the carboxyl terminus of a human class Mu glutathione S-transfe Solution structure of the carboxyl terminus of a human class Mu glutathione S-transferase: NMR assignment strategies in large proteins. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-PubMedLink.gif Related Articles Solution structure of the carboxyl terminus of a human class Mu glutathione S-transferase: NMR assignment strategies in large proteins. J Mol Biol. 1999 Feb 5;285(5):2119-32 Authors: McCallum SA, Hitchens TK, Rule GS Strategies to obtain the NMR assignments for the HN, N, CO, Calpha and...	nmrlearner	Journal club	0	08-21-2010 04:03 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off