Bariatric surgery decreases oxidative stress and protein glycosylation in patients with morbid obesity - MD Linx

		BioNMR > NMR community > Online News
Bariatric surgery decreases oxidative stress and protein glycosylation in patients with morbid obesity - MD Linx

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

07-16-2020, 09:01 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,732

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Bariatric surgery decreases oxidative stress and protein glycosylation in patients with morbid obesity - MD Linx

Bariatric surgery decreases oxidative stress and protein glycosylation in patients with morbid obesity - MD Linx

Bariatric surgery decreases oxidative stress and protein glycosylation in patients with morbid obesity MD Linx Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMR paper] Dopamine, Oxidative Stress and Protein–Quinone Modifications in Parkinson's and Other Neurodegenerative Diseases Dopamine, Oxidative Stress and Protein–Quinone Modifications in Parkinson's and Other Neurodegenerative Diseases Angewandte Chemie International Edition, Volume 58, Issue 20, Page 6512-6527, May 13, 2019. More...	nmrlearner	Journal club	0	05-06-2019 04:47 PM
Using Chemical Synthesis To Study and Apply Protein Glycosylation Using Chemical Synthesis To Study and Apply Protein Glycosylation http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.7b01055/20180114/images/medium/bi-2017-010556_0015.gif Biochemistry DOI: 10.1021/acs.biochem.7b01055 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/KmLgiLrr4Rc More...	nmrlearner	Journal club	0	01-17-2018 05:28 AM
[NMR paper] Determination of glucose exchange rates and permeability of erythrocyte membrane in preeclampsia and subsequent oxidative stress-related protein damage using dynamic-(19)F-NMR. Determination of glucose exchange rates and permeability of erythrocyte membrane in preeclampsia and subsequent oxidative stress-related protein damage using dynamic-(19)F-NMR. Related Articles Determination of glucose exchange rates and permeability of erythrocyte membrane in preeclampsia and subsequent oxidative stress-related protein damage using dynamic-(19)F-NMR. J Biomol NMR. 2017 Feb 21;: Authors: Dickinson E, Arnold JR, Fisher J Abstract The cause of the pregnancy condition preeclampsia (PE) is thought to be endothelial...	nmrlearner	Journal club	0	02-23-2017 11:08 AM
Determination of glucose exchange rates and permeability of erythrocyte membrane in preeclampsia and subsequent oxidative stress-related protein damage using dynamic- 19 F-NMR Determination of glucose exchange rates and permeability of erythrocyte membrane in preeclampsia and subsequent oxidative stress-related protein damage using dynamic- 19 F-NMR Abstract The cause of the pregnancy condition preeclampsia (PE) is thought to be endothelial dysfunction caused by oxidative stress. As abnormal glucose tolerance has also been associated with PE, we use a fluorinated-mimic of this metabolite to establish whether any oxidative damage to lipids and proteins in the erythrocyte membrane has increased cell membrane permeability....	nmrlearner	Journal club	0	02-22-2017 06:28 PM
[NMR paper] 1H NMR Based Targeted Metabolite Profiling for Understanding the Complex Relationship Connecting Oxidative Stress with Endometriosis. 1H NMR Based Targeted Metabolite Profiling for Understanding the Complex Relationship Connecting Oxidative Stress with Endometriosis. 1H NMR Based Targeted Metabolite Profiling for Understanding the Complex Relationship Connecting Oxidative Stress with Endometriosis. Biomed Res Int. 2013;2013:329058 Authors: Jana SK, Dutta M, Joshi M, Srivastava S, Chakravarty B, Chaudhury K Abstract Accumulating evidence indicates the active role of oxidative stress in the development of endometriosis; however, the mechanism of reactive oxygen species...	nmrlearner	Journal club	0	08-29-2013 01:53 PM
[Question from NMRWiki Q&A forum] S/N increases then decreases in 2D HMBC-type experiment S/N increases then decreases in 2D HMBC-type experiment Hello All Does anyone have any ideas on why the S/N would increase and then degrade during an HMBC-style experiment? If I process as I acquire, the S/N is best at about 3/4 through the experiment. At the end, the signals are still visible but the S/N has decreased. Both the instrument and the pulse sequence/pulse program appear to be working correctly (tested with other samples). Thank-you in advance.	nmrlearner	News from other NMR forums	0	07-26-2013 07:48 AM
[NMR paper] NMR-based metabolomics of urine in a mouse model of Alzheimer's disease: identification of oxidative stress biomarkers. NMR-based metabolomics of urine in a mouse model of Alzheimer's disease: identification of oxidative stress biomarkers. Related Articles NMR-based metabolomics of urine in a mouse model of Alzheimer's disease: identification of oxidative stress biomarkers. J Clin Biochem Nutr. 2013 Mar;52(2):133-8 Authors: Fukuhara K, Ohno A, Ota Y, Senoo Y, Maekawa K, Okuda H, Kurihara M, Okuno A, Niida S, Saito Y, Takikawa O Abstract Alzheimer's disease (AD) is the most common cause of neurodegenerative dementia among elderly patients. A biomarker...	nmrlearner	Journal club	0	03-26-2013 01:30 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off