Atomic-level motion may drive bacteria's ability to evade immune system defenses - Science Daily

		BioNMR > NMR community > Online News
Atomic-level motion may drive bacteria's ability to evade immune system defenses - Science Daily

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

04-22-2017, 07:21 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,776

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Atomic-level motion may drive bacteria's ability to evade immune system defenses - Science Daily

Science Daily

Atomic-level motion may drive bacteria's ability to evade immune system defenses
Science Daily
Through the use of nuclear magnetic resonance spectroscopy, he and colleagues measured the movement of atoms in CzrA and identified those most affected by zinc. They then "swapped" these atoms out with different amino acids and found that the protein ...

and more »

Atomic-level motion may drive bacteria's ability to evade immune system defenses - Science Daily
More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Atomic-level motion may drive bacteria's ability to evade immune system defenses Indiana University - EurekAlert (press release) http://www.bionmr.com//t1.gstatic.com/images?q=tbn:ANd9GcQua6i8f-w_dssq0DquUvqjy5IzgyN86xgfQGTv4zVJsgdI861V1sPT9EQddr7PiQtfcf1GCC-3 EurekAlert (press release) <img alt="" height="1" width="1"> Atomic-level motion may drive bacteria's ability to evade immune system defenses Indiana University EurekAlert (press release) Through the use of nuclear magnetic resonance spectroscopy, he and colleagues measured the movement of atoms in CzrA and identified those most affected by zinc. They then "swapped" these atoms out with different amino acids and found that the protein ... and more »...	nmrlearner	Online News	0	04-21-2017 03:35 PM
Alzheimer fibrils at atomic resolution: Fundamental structural ... - Science Daily http://www.bionmr.com//t1.gstatic.com/images?q=tbn:ANd9GcRTporn-sQJk1WxocjCEUAL_Nh3W0n5-KTk9qMl-4sxDiFn1dnkxeiZAwDa88hLGzIpHhnk2GZb Science 2.0 <img alt="" height="1" width="1"> Alzheimer fibrils at atomic resolution: Fundamental structural ... Science Daily Elongated fibers (fibrils) of the beta-amyloid protein form the typical senile plaques present in the brains of patients with Alzheimer's disease. A research team ... Alzheimer fibrils at atomic resolution \| EurekAlert! Science NewsEurekAlert (press release) all 4 news articles »	nmrlearner	Online News	0	08-06-2016 03:41 AM
Correlating Synthetic Methods, Morphology, Atomic-Level Structure, and Catalytic Activity of Sn-? Catalysts From The DNP-NMR Blog: Correlating Synthetic Methods, Morphology, Atomic-Level Structure, and Catalytic Activity of Sn-? Catalysts Wolf, P., et al., Correlating Synthetic Methods, Morphology, Atomic-Level Structure, and Catalytic Activity of Sn-? Catalysts. ACS Catalysis, 2016. 6(7): p. 4047-4063. http://dx.doi.org/10.1021/acscatal.6b00114	nmrlearner	News from NMR blogs	0	07-13-2016 10:22 PM
Brilliant hard drive quality with magnetic field sensors made of diamond - Science Daily <img alt="" height="1" width="1"> Brilliant hard drive quality with magnetic field sensors made of diamond Science Daily A further field of application could be the characterization of biological substances, e. g. proteins. The research program "NMR (Nuclear Magnetic Resonance) at the Nanoscale" has been launched in 2016 and will be running over the next three years. and more » Brilliant hard drive quality with magnetic field sensors made of diamond - Science Daily More...	nmrlearner	Online News	0	07-01-2016 03:22 PM
[NMR paper] NMR paves the way for atomic level descriptions of sparsely populated, transiently formed biomolecular conformers. NMR paves the way for atomic level descriptions of sparsely populated, transiently formed biomolecular conformers. Related Articles NMR paves the way for atomic level descriptions of sparsely populated, transiently formed biomolecular conformers. Proc Natl Acad Sci U S A. 2013 Jul 18; Authors: Sekhar A, Kay LE Abstract The importance of dynamics to biomolecular function is becoming increasingly clear. A description of the structure-function relationship must, therefore, include the role of motion, requiring a shift in paradigm from...	nmrlearner	Journal club	0	07-23-2013 09:52 PM
Protein 'Filmed' While Unfolding at Atomic Resolution - Science Daily (press release) <img alt="" height="1" width="1" /> Protein 'Filmed' While Unfolding at Atomic Resolution Science Daily (press release) We hoped that these quantities would be sufficient to examine the intermediate forms with nuclear magnetic resonance (NMR) spectroscopy," said Markus Zweckstetter, head of the research groups "Protein Structure Determination using MNR" at the MPIbpc ... and more » Protein 'Filmed' While Unfolding at Atomic Resolution - Science Daily (press release) More...	nmrlearner	Online News	0	02-11-2013 09:29 PM
Researchers closer to understanding how proteins regulate immune system - Eureka! Science News Researchers closer to understanding how proteins regulate immune system - Eureka! Science News <img alt="" height="1" width="1" /> Researchers closer to understanding how proteins regulate immune system Eureka! Science News Using powerful magnets and a technique called nuclear magnetic resonance (NMR) spectroscopy, Gifford and Vogel determined the molecular structure of the interaction between the two proteins, providing important insight at the molecular level into how ... and more » Read here	nmrlearner	Online News	0	07-04-2012 01:08 AM
[NMR paper] HYDRONMR: prediction of NMR relaxation of globular proteins from atomic-level structu HYDRONMR: prediction of NMR relaxation of globular proteins from atomic-level structures and hydrodynamic calculations. Related Articles HYDRONMR: prediction of NMR relaxation of globular proteins from atomic-level structures and hydrodynamic calculations. J Magn Reson. 2000 Nov;147(1):138-46 Authors: García de la Torre J, Huertas ML, Carrasco B The heteronuclear NMR relaxation of globular proteins depends on the anisotropic rotational diffusion tensor. Using our previous developments for prediction of hydrodynamic properties of arbitrarily...	nmrlearner	Journal club	0	11-19-2010 08:29 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off