Atomic-level motion may drive bacteria's ability to evade immune system defenses, finds IU study - IU Newsroom

		BioNMR > NMR community > Online News
Atomic-level motion may drive bacteria's ability to evade immune system defenses, finds IU study - IU Newsroom

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

05-16-2017, 10:27 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,776

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Atomic-level motion may drive bacteria's ability to evade immune system defenses, finds IU study - IU Newsroom

IU Newsroom

Atomic-level motion may drive bacteria's ability to evade immune system defenses, finds IU study
IU Newsroom
Through the use of nuclear magnetic resonance spectroscopy, he and colleagues measured the movement of atoms in CzrA and identified those most affected by zinc. They then "swapped" these atoms out with different amino acids and found that the protein ...

and more »

Atomic-level motion may drive bacteria's ability to evade immune system defenses, finds IU study - IU Newsroom
More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Atomic-level motion may drive bacteria's ability to evade immune system defenses - Science Daily http://www.bionmr.com//t3.gstatic.com/images?q=tbn:ANd9GcS9ZK4z2mc9CF0y_2jMyBOVdjQWlJM9DDGFDL9m3N2CG2M4S9WkAwPBySBtFr2VU77YRvBjsfQa Science Daily <img alt="" height="1" width="1"> Atomic-level motion may drive bacteria's ability to evade immune system defenses Science Daily Through the use of nuclear magnetic resonance spectroscopy, he and colleagues measured the movement of atoms in CzrA and identified those most affected by zinc. They then "swapped" these atoms out with different amino acids and found that the protein ... and more » Atomic-level motion may drive bacteria's...	nmrlearner	Online News	0	04-22-2017 07:21 AM
Atomic-level motion may drive bacteria's ability to evade immune system defenses Indiana University - EurekAlert (press release) http://www.bionmr.com//t1.gstatic.com/images?q=tbn:ANd9GcQua6i8f-w_dssq0DquUvqjy5IzgyN86xgfQGTv4zVJsgdI861V1sPT9EQddr7PiQtfcf1GCC-3 EurekAlert (press release) <img alt="" height="1" width="1"> Atomic-level motion may drive bacteria's ability to evade immune system defenses Indiana University EurekAlert (press release) Through the use of nuclear magnetic resonance spectroscopy, he and colleagues measured the movement of atoms in CzrA and identified those most affected by zinc. They then "swapped" these atoms out with different amino acids and found that the protein ... and more »...	nmrlearner	Online News	0	04-21-2017 03:35 PM
Solid state NMR of isotope labelled murine fur: a powerful tool to study atomic level keratin structure and treatment effects Solid state NMR of isotope labelled murine fur: a powerful tool to study atomic level keratin structure and treatment effects Abstract We have prepared mouse fur extensively 13C,15N-labelled in all amino acid types enabling application of 2D solid state NMR techniques which establish covalent and spatial proximities within, and in favorable cases between, residues. 13C double quantumâ??single quantum correlation and proton driven spin diffusion techniques are particularly useful for resolving certain amino acid types. Unlike 1D experiments on...	nmrlearner	Journal club	0	11-19-2016 08:35 PM
Correlating Synthetic Methods, Morphology, Atomic-Level Structure, and Catalytic Activity of Sn-? Catalysts From The DNP-NMR Blog: Correlating Synthetic Methods, Morphology, Atomic-Level Structure, and Catalytic Activity of Sn-? Catalysts Wolf, P., et al., Correlating Synthetic Methods, Morphology, Atomic-Level Structure, and Catalytic Activity of Sn-? Catalysts. ACS Catalysis, 2016. 6(7): p. 4047-4063. http://dx.doi.org/10.1021/acscatal.6b00114	nmrlearner	News from NMR blogs	0	07-13-2016 10:22 PM
[NMR paper] Cationic membrane peptides: atomic-level insight of structure-activity relationships from solid-state NMR. Cationic membrane peptides: atomic-level insight of structure-activity relationships from solid-state NMR. http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--production.springer.de-OnlineResources-Logos-springerlink.gif Related Articles Cationic membrane peptides: atomic-level insight of structure-activity relationships from solid-state NMR. Amino Acids. 2013 Mar;44(3):821-33 Authors: Su Y, Li S, Hong M Abstract Many membrane-active peptides, such as cationic cell-penetrating peptides (CPPs) and antimicrobial peptides...	nmrlearner	Journal club	0	08-15-2013 07:45 PM
[NMR paper] NMR paves the way for atomic level descriptions of sparsely populated, transiently formed biomolecular conformers. NMR paves the way for atomic level descriptions of sparsely populated, transiently formed biomolecular conformers. Related Articles NMR paves the way for atomic level descriptions of sparsely populated, transiently formed biomolecular conformers. Proc Natl Acad Sci U S A. 2013 Jul 18; Authors: Sekhar A, Kay LE Abstract The importance of dynamics to biomolecular function is becoming increasingly clear. A description of the structure-function relationship must, therefore, include the role of motion, requiring a shift in paradigm from...	nmrlearner	Journal club	0	07-23-2013 09:52 PM
Researchers closer to understanding how proteins regulate immune system - Eureka! Science News Researchers closer to understanding how proteins regulate immune system - Eureka! Science News <img alt="" height="1" width="1" /> Researchers closer to understanding how proteins regulate immune system Eureka! Science News Using powerful magnets and a technique called nuclear magnetic resonance (NMR) spectroscopy, Gifford and Vogel determined the molecular structure of the interaction between the two proteins, providing important insight at the molecular level into how ... and more » Read here	nmrlearner	Online News	0	07-04-2012 01:08 AM
[NMR paper] HYDRONMR: prediction of NMR relaxation of globular proteins from atomic-level structu HYDRONMR: prediction of NMR relaxation of globular proteins from atomic-level structures and hydrodynamic calculations. Related Articles HYDRONMR: prediction of NMR relaxation of globular proteins from atomic-level structures and hydrodynamic calculations. J Magn Reson. 2000 Nov;147(1):138-46 Authors: García de la Torre J, Huertas ML, Carrasco B The heteronuclear NMR relaxation of globular proteins depends on the anisotropic rotational diffusion tensor. Using our previous developments for prediction of hydrodynamic properties of arbitrarily...	nmrlearner	Journal club	0	11-19-2010 08:29 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off