Protein folding and unfolding studied at atomic resolution by fast two-dimensional NMR spectroscopy - pnas.org

		BioNMR > NMR community > Online News
Protein folding and unfolding studied at atomic resolution by fast two-dimensional NMR spectroscopy - pnas.org

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

View First Unread

Thread Tools

Search this Thread

Rate Thread

Display Modes

03-08-2025, 01:15 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,910

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Protein folding and unfolding studied at atomic resolution by fast two-dimensional NMR spectroscopy - pnas.org

Protein folding and unfolding studied at atomic resolution by fast two-dimensional NMR spectroscopy - pnas.org

Protein folding and unfolding studied at atomic resolution by fast two-dimensional NMR spectroscopy pnas.org Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Docking-based long timescale simulation of cell-size protein systems at atomic resolution \| Proceedings of the National Academy of Sciences - pnas.org Docking-based long timescale simulation of cell-size protein systems at atomic resolution \| Proceedings of the National Academy of Sciences - pnas.org Docking-based long timescale simulation of cell-size protein systems at atomic resolution \| Proceedings of the National Academy of Sciences pnas.org Read here	nmrlearner	Online News	0	10-16-2022 03:12 AM
Multi-eGO: An in silico lens to look into protein aggregation kinetics at atomic resolution \| Proceedings of the National Academy of Sciences - pnas.org Multi-eGO: An in silico lens to look into protein aggregation kinetics at atomic resolution \| Proceedings of the National Academy of Sciences - pnas.org Multi-eGO: An in silico lens to look into protein aggregation kinetics at atomic resolution \| Proceedings of the National Academy of Sciences pnas.org Read here	nmrlearner	Online News	0	06-23-2022 06:52 PM
[NMR paper] In-Cell NMR Spectroscopy-In vivo Monitoring of the Structure, Dynamics, Folding, and Interactions of Proteins at Atomic Resolution. In-Cell NMR Spectroscopy-In vivo Monitoring of the Structure, Dynamics, Folding, and Interactions of Proteins at Atomic Resolution. In-Cell NMR Spectroscopy-In vivo Monitoring of the Structure, Dynamics, Folding, and Interactions of Proteins at Atomic Resolution. J Anal Bioanal Tech. 2013 Jan 2;4(1):e112 Authors: Kumar TK, Thurman R, Jayanthi S PMID: 23956945	nmrlearner	Journal club	0	08-21-2013 08:49 PM
Researchers Film Complex Process of Protein Folding At Atomic Resolution - AZoNano.com <img alt="" height="1" width="1" /> Researchers Film Complex Process of Protein Folding At Atomic Resolution AZoNano.com We hoped that these quantities would be sufficient to examine the intermediate forms with nuclear magnetic resonance (NMR) spectroscopy," said Markus Zweckstetter, head of the research groups "Protein Structure Determination using MNR" at the MPIbpc ... and more » Researchers Film Complex Process of Protein Folding At Atomic Resolution - AZoNano.com More...	nmrlearner	Online News	0	02-12-2013 11:00 AM
Protein 'Filmed' While Unfolding at Atomic Resolution - Science Daily (press release) <img alt="" height="1" width="1" /> Protein 'Filmed' While Unfolding at Atomic Resolution Science Daily (press release) We hoped that these quantities would be sufficient to examine the intermediate forms with nuclear magnetic resonance (NMR) spectroscopy," said Markus Zweckstetter, head of the research groups "Protein Structure Determination using MNR" at the MPIbpc ... and more » Protein 'Filmed' While Unfolding at Atomic Resolution - Science Daily (press release) More...	nmrlearner	Online News	0	02-11-2013 09:29 PM
Atomic-resolution three-dimensional structure of HET-s(218-289) amyloid fibrils by solid-state NMR spectroscopy. Atomic-resolution three-dimensional structure of HET-s(218-289) amyloid fibrils by solid-state NMR spectroscopy. Atomic-resolution three-dimensional structure of HET-s(218-289) amyloid fibrils by solid-state NMR spectroscopy. J Am Chem Soc. 2010 Oct 6;132(39):13765-75 Authors: Van Melckebeke H, Wasmer C, Lange A, Ab E, Loquet A, Böckmann A, Meier BH We present a strategy to solve the high-resolution structure of amyloid fibrils by solid-state NMR and use it to determine the atomic-resolution structure of the prion domain of the fungal prion HET-s...	nmrlearner	Journal club	0	01-21-2011 12:00 PM
A Transient and Low-Populated Protein-Folding Intermediate at Atomic Resolution - Sec A Transient and Low-Populated Protein-Folding Intermediate at Atomic Resolution - Securities Industry News (blog) (subscription) <img alt="" height="1" width="1" /> A Transient and Low-Populated Protein-Folding Intermediate at Atomic Resolution Securities Industry News (blog) (subscription) In this work, we used chemical shifts and bond-vector orientation constraints obtained from nuclear magnetic resonance relaxation dispersion spectroscopy, ... Read More	nmrlearner	Online News	0	09-10-2010 12:48 AM
[NMR paper] Protein folding studied using hydrogen-exchange labeling and two-dimensional NMR. Protein folding studied using hydrogen-exchange labeling and two-dimensional NMR. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--arjournals.annualreviews.org-images-AnnualReviews100x25.gif Related Articles Protein folding studied using hydrogen-exchange labeling and two-dimensional NMR. Annu Rev Biophys Biomol Struct. 1992;21:243-65 Authors: Englander SW, Mayne L HX-labeling experiments in the pH-pulse mode show that protein folding can be remarkably fast. A near-native form can be reached within milliseconds. Experimental analysis of...	nmrlearner	Journal club	0	08-21-2010 11:41 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off