BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > Online News
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 01-07-2019, 05:49 AM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,777
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Analyzing dynamic proteins - MIT News

Analyzing dynamic proteins - MIT News

Analyzing dynamic proteins MIT NewsMIT chemistry professor Mei Hong develops new techniques for studying the dynamic structures of proteins embedded in cell membranes.

Read here
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
Analyzing protein structures in their native environment - MIT News
Analyzing protein structures in their native environment - MIT News Analyzing protein structures in their native environment MIT NewsProteins can fold in different ways depending on their environment. These different configurations change the function of the protein; misfolding is frequently ... Read here
nmrlearner Online News 0 01-07-2019 05:49 AM
Analyzing dynamic proteins - MIT News
Analyzing dynamic proteins - MIT News http://www.bionmr.com//t3.gstatic.com/images?q=tbn:ANd9GcTobNzta_RaEHeh6XPJeaAn7b1SOF0K8sCFAWm8oDbfVWWX9dLKH-0BLuWl5RqDkLwHX6DzhuVY MIT News <img alt="" height="1" width="1"> Analyzing dynamic proteins MIT News For her PhD thesis, Hong used NMR to study how phospholipids, the major building blocks of membranes, take on their shapes. These molecules consist of fatty tails that face inward and protein heads that face outward. This research helped prepare her ...
nmrlearner Online News 0 08-08-2016 12:19 PM
Revealing dynamic protein complexes with NMR: an interview with Elisar Barbar - News-Medical.net
Revealing dynamic protein complexes with NMR: an interview with Elisar Barbar - News-Medical.net http://www.bionmr.com//t3.gstatic.com/images?q=tbn:ANd9GcQAUeftlGgK3d5S-pqiIVCQmBJHU9ZDe44hgJ0jUOWMmdjhcV1TI5zGgWu0KacYldtmmtTupMSd News-Medical.net <img alt="" height="1" width="1"> Revealing dynamic protein complexes with NMR: an interview with Elisar Barbar News-Medical.net In my lab, we focus on understanding structure, assembly and regulation of the LC8 protein interaction network, the array of LC8 interactions with diverse partners which affect multiple cellular functions in...
nmrlearner Online News 0 02-18-2016 08:10 PM
Analyzing protein structures in their native environment - MIT News
Analyzing protein structures in their native environment - MIT News http://www.bionmr.com//t2.gstatic.com/images?q=tbn:ANd9GcTcqYE5wgM8a6TqBqTYMSog4dYAq_wzIgq9PpZ2zCpiYjAuPJvlMV-Fsr8pWZC9atnwU4L56ij8 MIT News <img alt="" height="1" width="1"> Analyzing protein structures in their native environment MIT News Until now, it has been difficult to fully characterize the different structures that proteins can take on in their natural environments. However, using a new technique known as sensitivity-enhanced nuclear magnetic resonance (NMR), MIT researchers have ... and more &raquo;
nmrlearner Online News 0 11-22-2015 01:36 AM
More Dynamic Protein Profiling - Genetic Engineering & Biotechnology News
More Dynamic Protein Profiling - Genetic Engineering & Biotechnology News http://www.bionmr.com//t1.gstatic.com/images?q=tbn:ANd9GcSH48r3aujWbx95_VFW3STldjHZy66sjn9UvqtaALJMckWK_undUCMCd2zKQQ0TVbNS9CX_qoMf Genetic Engineering & Biotechnology News <img alt="" height="1" width="1"> More Dynamic Protein Profiling Genetic Engineering & Biotechnology News â??As a tool for preventing unnecessary work on the structure determination side, we introduced the 'NMR Profile' for identifying, from among the many proteins that we screen, those that are available as a structure-quality solution and...
nmrlearner Online News 0 09-02-2015 05:44 AM
[NMR paper] Analyzing protein-ligand interactions by dynamic NMR spectroscopy.
Analyzing protein-ligand interactions by dynamic NMR spectroscopy. Related Articles Analyzing protein-ligand interactions by dynamic NMR spectroscopy. Methods Mol Biol. 2013;1008:243-66 Authors: Mittermaier A, Meneses E Abstract Nuclear magnetic resonance (NMR) spectroscopy can provide detailed information on protein-ligand interactions that is inaccessible using other biophysical techniques. This chapter focuses on NMR-based approaches for extracting affinity and rate constants for weakly binding transient protein complexes with lifetimes...
nmrlearner Journal club 0 06-05-2013 06:53 PM
Bruker and Berkeley Lab Combine NMR with SAXS for Analyzing Large Protein ... - Genetic Engineering News
http://nt1.ggpht.com/news/tbn/pbujffOLTN-5EM/6.jpg SunHerald.com <img alt="" height="1" width="1" /> Bruker and Berkeley Lab Combine NMR with SAXS for Analyzing Large Protein ... Genetic Engineering News Bruker and Lawrence Berkeley National Laboratory are collaborating to develop structural biology methods and tools that integrate small-angle x-ray scattering (SAXS) technology with nuclear magnetic resonance (NMR). The aim is to generate a set of data ... Bruker and Lawrence Berkeley National Laboratory Collaborate on Novel ...MarketWatch (press release) all 14 news articles &raquo;
nmrlearner Online News 0 11-11-2011 08:26 AM
Bruker and Berkeley Lab Combine NMR with SAXS for Analyzing Large Protein ... - Genetic Engineering News
Bruker and Berkeley Lab Combine NMR with SAXS for Analyzing Large Protein ... - Genetic Engineering News http://nt1.ggpht.com/news/tbn/pbujffOLTN-5EM/6.jpg SunHerald.com <img alt="" height="1" width="1" /> Bruker and Berkeley Lab Combine NMR with SAXS for Analyzing Large Protein ... Genetic Engineering News The aim is to generate a set of data analysis algorithms for determining the structures of larger, multi-domain proteins and protein complexes with DNA, RNA or other proteins. The organizations claim that combining the NMR-derived 3-dimensional atomic ... Bruker and Lawrence...
nmrlearner Online News 0 11-10-2011 08:09 PM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 04:59 AM.


Map