NMR images Prion protein NMR structures

		BioNMR > NMR community > NMR pictures
[NMR images] Prion protein NMR structures

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

12-06-2010, 09:44 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,775

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Prion protein NMR structures

pnas.org
1/11/2010 9:20:48 PM GMT
Prion protein NMR structures
More...

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMR images] Prion protein NMR structures <IMG src="http://www.pnas.org/content/102/3/646/F2.large.jpg" width="50%"></IMG> http://www.pnas.org/content/102/3/646/F2.expansion.html 20/12/2011 4:11:44 PM GMT Prion protein NMR structures More...	nmrlearner	NMR pictures	0	01-09-2012 08:08 AM
Toward the Molecular Basis of Inherited Prion Diseases: NMR Structure of the Human Prion Protein with V210I Mutation. Toward the Molecular Basis of Inherited Prion Diseases: NMR Structure of the Human Prion Protein with V210I Mutation. Toward the Molecular Basis of Inherited Prion Diseases: NMR Structure of the Human Prion Protein with V210I Mutation. J Mol Biol. 2011 Aug 4; Authors: Biljan I, Ilc G, Giachin G, Raspadori A, Zhukov I, Plavec J, Legname G The development of transmissible spongiform encephalopathies (TSEs) is associated with the conversion of the cellular prion protein (PrP(C)) into a misfolded, pathogenic isoform (PrP(Sc)). Spontaneous generation...	nmrlearner	Journal club	0	08-16-2011 01:19 PM
[NMR paper] Prion protein NMR structures of cats, dogs, pigs, and sheep. Prion protein NMR structures of cats, dogs, pigs, and sheep. Related Articles Prion protein NMR structures of cats, dogs, pigs, and sheep. Proc Natl Acad Sci U S A. 2005 Jan 18;102(3):640-5 Authors: Lysek DA, Schorn C, Nivon LG, Esteve-Moya V, Christen B, Calzolai L, von Schroetter C, Fiorito F, Herrmann T, Güntert P, Wüthrich K The NMR structures of the recombinant cellular form of the prion proteins (PrPC) of the cat (Felis catus), dog (Canis familiaris), and pig (Sus scrofa), and of two polymorphic forms of the prion protein from sheep...	nmrlearner	Journal club	0	11-24-2010 11:14 PM
[NMR paper] Prion protein NMR structures of chickens, turtles, and frogs. Prion protein NMR structures of chickens, turtles, and frogs. Related Articles Prion protein NMR structures of chickens, turtles, and frogs. Proc Natl Acad Sci U S A. 2005 Jan 18;102(3):651-5 Authors: Calzolai L, Lysek DA, Pérez DR, Güntert P, Wüthrich K The NMR structures of the recombinant prion proteins from chicken (Gallus gallus; chPrP), the red-eared slider turtle (Trachemys scripta; tPrP), and the African clawed frog (Xenopus laevis; xlPrP) are presented. The amino acid sequences of these prion proteins show approximately 30% identity...	nmrlearner	Journal club	0	11-24-2010 11:14 PM
[NMR paper] Prion protein NMR structures of elk and of mouse/elk hybrids. Prion protein NMR structures of elk and of mouse/elk hybrids. Prion protein NMR structures of elk and of mouse/elk hybrids. Proc Natl Acad Sci U S A. 2005 Jan 18;102(3):646-50 Authors: Gossert AD, Bonjour S, Lysek DA, Fiorito F, Wüthrich K The NMR structure of the recombinant elk prion protein (ePrP), which represents the cellular isoform (ePrPC) in the healthy organism, is described here. As anticipated from the highly conserved amino acid sequence, ePrPC has the same global fold as other mammalian prion proteins (PrPs), with a flexibly...	nmrlearner	Journal club	0	11-24-2010 11:14 PM
[NMR paper] NMR structures of three single-residue variants of the human prion protein. NMR structures of three single-residue variants of the human prion protein. Related Articles NMR structures of three single-residue variants of the human prion protein. Proc Natl Acad Sci U S A. 2000 Jul 18;97(15):8340-5 Authors: Calzolai L, Lysek DA, Guntert P, von Schroetter C, Riek R, Zahn R, Wüthrich K The NMR structures of three single-amino acid variants of the C-terminal domain of the human prion protein, hPrP(121-230), are presented. In hPrP(M166V) and hPrP(R220K) the substitution is with the corresponding residue in murine PrP, and in...	nmrlearner	Journal club	0	11-19-2010 08:29 PM
[NMR images] Prion protein NMR structures <a href=http://obsrv.com/FeedItems/ShowFeedItemsPage.aspx?FeedItems=31908719 target="_blank" ><img src='http://www.pnas.org/content/102/3/646/F1.large.jpg' width='320px' /></a><br/>pnas.org<br/>1/11/2010 8:47:38 AM GMT Prion protein NMR structures More...	nmrlearner	NMR pictures	0	11-01-2010 09:06 AM
[NMR paper] Prion protein NMR structure and species barrier for prion diseases. Prion protein NMR structure and species barrier for prion diseases. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--highwire.stanford.edu-icons-externalservices-pubmed-custom-pnas_full_free.gif http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www.pubmedcentral.nih.gov-corehtml-pmc-pmcgifs-pubmed-pmc.gif Related Articles Prion protein NMR structure and species barrier for prion diseases. Proc Natl Acad Sci U S A. 1997 Jul 8;94(14):7281-5 Authors: Billeter M, Riek R, Wider G, Hornemann S, Glockshuber R, WÃ¼thrich K The structural...	nmrlearner	Journal club	0	08-22-2010 05:08 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off