Tercera animación del canal de NMRC. Creado por @_Romanovak. En esta ocasión, Yayo se enfrenta contra Ben Affleck. Síguelo por Twitter: http://www.twitter.co...
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[KPWU blog] [PyMOL] Sidechain helper in the cartoon view
Sidechain helper in the cartoon view
Using cartoon view to present the protein secondary structures and tertiary structure is common and we also often see people present some sidechains of particular residues which may be important in some biological roles. In PyMOL, when sidechain atoms are presented in the “sticks mode” with the cartoon*scaffold, we always see the backbone atoms (e.g. http://stats.wordpress.com/b.gif?host=kpwu.wordpress.com&blog=76132&post=609&subd=kpwu&ref=&feed=1
Go to KPWU blog to read complete post.
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11-13-2011 04:51 AM
[KPWU blog] Some cartoon views of proteins shown in PyMOL
Some cartoon views of proteins shown in PyMOL
Example of cartoon modes of protein shown by PyMOL Example protein: 1UA8, LolA By default, the cartoon mode in PyMOL shows protein structure like this way: We can change the background to white by typing “bg_color white” in the command terminal and also change the color of protein based on types of secondary structures in http://stats.wordpress.com/b.gif?host=kpwu.wordpress.com&blog=76132&post=526&subd=kpwu&ref=&feed=1
Go to KPWU blog to read complete post.